Analysis of interatomic Contacts of Structural Units in PDB entry:
5BYM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5BYM entry

There are 2 chains in PDB entry 5BYM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 202THR 599
C
 U 1 A 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5BYM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
202 208Right-handed alpha
Helix 2
AA2
A
209 213Right-handed 310
Helix 3
AA3
A
214 220Right-handed alpha
Helix 4
AA4
A
221 233Right-handed alpha
Helix 5
AA5
A
238 250Right-handed alpha
Helix 6
AA6
A
252 259Right-handed alpha
Helix 7
AA7
A
262 271Right-handed alpha
Helix 8
AA8
A
274 286Right-handed alpha
Helix 9
AA9
A
288 294Right-handed alpha
Helix 10
AB1
A
297 307Right-handed alpha
Helix 11
AB2
A
311 323Right-handed alpha
Helix 12
AB3
A
328 338Right-handed alpha
Helix 13
AB4
A
341 352Right-handed alpha
Helix 14
AB5
A
353 356Right-handed 310
Helix 15
AB6
A
357 366Right-handed alpha
Helix 16
AB7
A
368 375Right-handed alpha
Helix 17
AB8
A
376 390Right-handed alpha
Helix 18
AB9
A
391 405Right-handed alpha
Helix 19
AC1
A
405 410Right-handed alpha
Helix 20
AC2
A
414 423Right-handed alpha
Helix 21
AC3
A
424 427Right-handed 310
Helix 22
AC4
A
428 441Right-handed alpha
Helix 23
AC5
A
443 448Right-handed alpha
Helix 24
AC6
A
452 472Right-handed alpha
Helix 25
AC7
A
487 508Right-handed alpha
Helix 26
AC8
A
508 513Right-handed alpha
Helix 27
AC9
A
517 527Right-handed alpha
Helix 28
AD1
A
527 532Right-handed alpha
Helix 29
AD2
A
558 571Right-handed alpha
Helix 30
AD3
A
575 580Right-handed 310
Helix 31
AD4
A
584 597Right-handed alpha
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There are no sheets in PDB entry 5BYM
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