Analysis of interatomic Contacts of Structural Units in PDB entry:
5C18


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C18 entry

There is 1 chain in PDB entry 5C18 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 21ARG 662
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are221 helices in PDB entry 5C18. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
42 47Right-handed alpha
Helix 2
AA2
A
85 92Right-handed alpha
Helix 3
AA3
A
120 123Right-handed 310
Helix 4
AA4
A
129 134Right-handed alpha
Helix 5
AA5
A
134 140Right-handed alpha
Helix 6
AA6
A
202 206Right-handed 310
Helix 7
AA7
A
209 226Right-handed alpha
Helix 8
AA8
A
226 234Right-handed alpha
Helix 9
AA9
A
250 263Right-handed alpha
Helix 10
AB1
A
271 276Right-handed alpha
Helix 11
AB2
A
278 296Right-handed alpha
Helix 12
AB3
A
306 309Right-handed 310
Helix 13
AB4
A
319 334Right-handed alpha
Helix 14
AB5
A
335 338Right-handed 310
Helix 15
AB6
A
349 353Right-handed 310
Helix 16
AB7
A
354 358Right-handed 310
Helix 17
AB8
A
373 384Right-handed alpha
Helix 18
AB9
A
395 402Right-handed alpha
Helix 19
AC1
A
407 427Right-handed alpha
Helix 20
AC2
A
438 445Right-handed alpha
Helix 21
AC3
A
448 458Right-handed alpha
Helix 22
AC4
A
475 479Right-handed 310
Helix 23
AC5
A
482 499Right-handed alpha
Helix 24
AC6
A
499 507Right-handed alpha
Helix 25
AC7
A
523 535Right-handed alpha
Helix 26
AC8
A
544 550Right-handed alpha
Helix 27
AC9
A
551 569Right-handed alpha
Helix 28
AD1
A
579 587Right-handed alpha
Helix 29
AD2
A
596 611Right-handed alpha
Helix 30
AD3
A
612 615Right-handed 310
Helix 31
AD4
A
625 629Right-handed 310
Helix 32
AD5
A
630 635Right-handed 310
Helix 33
AD6
A
649 661Right-handed alpha
Helix 34
AD7
A
662 664Right-handed 310
Helix 35
AD8
A
671 679Right-handed alpha
Helix 36
AD9
A
683 706Right-handed alpha
Helix 37
AE1
A
732 743Right-handed alpha
Helix 38
AE2
A
748 762Right-handed alpha
Helix 39
AE3
A
763 767Right-handed 310
Helix 40
AE4
B
42 47Right-handed alpha
Helix 41
AE5
B
85 92Right-handed alpha
Helix 42
AE6
B
120 123Right-handed 310
Helix 43
AE7
B
129 134Right-handed alpha
Helix 44
AE8
B
134 140Right-handed alpha
Helix 45
AE9
B
202 206Right-handed 310
Helix 46
AF1
B
209 226Right-handed alpha
Helix 47
AF2
B
226 234Right-handed alpha
Helix 48
AF3
B
250 263Right-handed alpha
Helix 49
AF4
B
271 275Right-handed alpha
Helix 50
AF5
B
278 296Right-handed alpha
Helix 51
AF6
B
305 309Right-handed 310
Helix 52
AF7
B
318 335Right-handed alpha
Helix 53
AF8
B
336 338Right-handed 310
Helix 54
AF9
B
349 353Right-handed 310
Helix 55
AG1
B
354 359Right-handed 310
Helix 56
AG2
B
373 385Right-handed alpha
Helix 57
AG3
B
395 402Right-handed alpha
Helix 58
AG4
B
407 428Right-handed alpha
Helix 59
AG5
B
438 445Right-handed alpha
Helix 60
AG6
B
448 458Right-handed alpha
Helix 61
AG7
B
475 479Right-handed 310
Helix 62
AG8
B
482 499Right-handed alpha
Helix 63
AG9
B
499 507Right-handed alpha
Helix 64
AH1
B
523 535Right-handed alpha
Helix 65
AH2
B
544 550Right-handed alpha
Helix 66
AH3
B
554 569Right-handed alpha
Helix 67
AH4
B
579 587Right-handed alpha
Helix 68
AH5
B
596 611Right-handed alpha
Helix 69
AH6
B
625 629Right-handed 310
Helix 70
AH7
B
630 635Right-handed 310
Helix 71
AH8
B
649 661Right-handed alpha
Helix 72
AH9
B
662 664Right-handed 310
Helix 73
AI1
B
671 679Right-handed alpha
Helix 74
AI2
B
683 705Right-handed alpha
Helix 75
AI3
B
732 742Right-handed alpha
Helix 76
AI4
B
748 762Right-handed alpha
Helix 77
AI5
B
763 765Right-handed 310
Helix 78
AI6
C
42 50Right-handed alpha
Helix 79
AI7
C
85 92Right-handed alpha
Helix 80
AI8
C
120 123Right-handed 310
Helix 81
AI9
C
129 134Right-handed alpha
Helix 82
AJ1
C
134 140Right-handed alpha
Helix 83
AJ2
C
202 206Right-handed 310
Helix 84
AJ3
C
209 226Right-handed alpha
Helix 85
AJ4
C
226 234Right-handed alpha
Helix 86
AJ5
C
250 263Right-handed alpha
Helix 87
AJ6
C
271 276Right-handed alpha
Helix 88
AJ7
C
280 296Right-handed alpha
Helix 89
AJ8
C
306 309Right-handed 310
Helix 90
AJ9
C
318 334Right-handed alpha
Helix 91
AK1
C
335 338Right-handed 310
Helix 92
AK2
C
354 359Right-handed 310
Helix 93
AK3
C
373 384Right-handed alpha
Helix 94
AK4
C
395 402Right-handed alpha
Helix 95
AK5
C
407 428Right-handed alpha
Helix 96
AK6
C
438 445Right-handed alpha
Helix 97
AK7
C
448 458Right-handed alpha
Helix 98
AK8
C
475 479Right-handed 310
Helix 99
AK9
C
482 499Right-handed alpha
Helix 100
AL1
C
499 506Right-handed alpha
Helix 101
AL2
C
523 535Right-handed alpha
Helix 102
AL3
C
544 548Right-handed alpha
Helix 103
AL4
C
554 569Right-handed alpha
Helix 104
AL5
C
579 587Right-handed alpha
Helix 105
AL6
C
596 611Right-handed alpha
Helix 106
AL7
C
649 661Right-handed alpha
Helix 107
AL8
C
671 679Right-handed alpha
Helix 108
AL9
C
683 705Right-handed alpha
Helix 109
AM1
C
732 743Right-handed alpha
Helix 110
AM2
C
748 762Right-handed alpha
Helix 111
AM3
C
763 765Right-handed 310
Helix 112
AM4
D
42 49Right-handed alpha
Helix 113
AM5
D
85 92Right-handed alpha
Helix 114
AM6
D
120 123Right-handed 310
Helix 115
AM7
D
129 134Right-handed alpha
Helix 116
AM8
D
134 140Right-handed alpha
Helix 117
AM9
D
202 206Right-handed 310
Helix 118
AN1
D
209 226Right-handed alpha
Helix 119
AN2
D
226 234Right-handed alpha
Helix 120
AN3
D
250 263Right-handed alpha
Helix 121
AN4
D
271 277Right-handed alpha
Helix 122
AN5
D
278 296Right-handed alpha
Helix 123
AN6
D
305 310Right-handed alpha
Helix 124
AN7
D
312 316Right-handed 310
Helix 125
AN8
D
318 334Right-handed alpha
Helix 126
AN9
D
335 338Right-handed 310
Helix 127
AO1
D
349 353Right-handed 310
Helix 128
AO2
D
354 359Right-handed 310
Helix 129
AO3
D
373 384Right-handed alpha
Helix 130
AO4
D
395 402Right-handed alpha
Helix 131
AO5
D
407 428Right-handed alpha
Helix 132
AO6
D
438 445Right-handed alpha
Helix 133
AO7
D
448 458Right-handed alpha
Helix 134
AO8
D
475 479Right-handed 310
Helix 135
AO9
D
482 499Right-handed alpha
Helix 136
AP1
D
499 507Right-handed alpha
Helix 137
AP2
D
523 536Right-handed alpha
Helix 138
AP3
D
544 549Right-handed alpha
Helix 139
AP4
D
553 558Right-handed alpha
Helix 140
AP5
D
558 569Right-handed alpha
Helix 141
AP6
D
579 587Right-handed alpha
Helix 142
AP7
D
596 610Right-handed alpha
Helix 143
AP8
D
630 635Right-handed 310
Helix 144
AP9
D
649 661Right-handed alpha
Helix 145
AQ1
D
671 679Right-handed alpha
Helix 146
AQ2
D
683 706Right-handed alpha
Helix 147
AQ3
D
733 743Right-handed alpha
Helix 148
AQ4
D
748 762Right-handed alpha
Helix 149
AQ5
D
763 767Right-handed 310
Helix 150
AQ6
E
42 50Right-handed alpha
Helix 151
AQ7
E
85 92Right-handed alpha
Helix 152
AQ8
E
120 123Right-handed 310
Helix 153
AQ9
E
129 134Right-handed alpha
Helix 154
AR1
E
134 140Right-handed alpha
Helix 155
AR2
E
202 206Right-handed 310
Helix 156
AR3
E
209 226Right-handed alpha
Helix 157
AR4
E
226 234Right-handed alpha
Helix 158
AR5
E
250 263Right-handed alpha
Helix 159
AR6
E
271 275Right-handed alpha
Helix 160
AR7
E
278 296Right-handed alpha
Helix 161
AR8
E
306 309Right-handed 310
Helix 162
AR9
E
318 334Right-handed alpha
Helix 163
AS1
E
335 338Right-handed 310
Helix 164
AS2
E
349 353Right-handed 310
Helix 165
AS3
E
354 359Right-handed 310
Helix 166
AS4
E
373 385Right-handed alpha
Helix 167
AS5
E
395 402Right-handed alpha
Helix 168
AS6
E
407 428Right-handed alpha
Helix 169
AS7
E
438 445Right-handed alpha
Helix 170
AS8
E
448 458Right-handed alpha
Helix 171
AS9
E
475 479Right-handed 310
Helix 172
AT1
E
482 499Right-handed alpha
Helix 173
AT2
E
499 507Right-handed alpha
Helix 174
AT3
E
523 535Right-handed alpha
Helix 175
AT4
E
544 550Right-handed alpha
Helix 176
AT5
E
554 569Right-handed alpha
Helix 177
AT6
E
579 587Right-handed alpha
Helix 178
AT7
E
597 611Right-handed alpha
Helix 179
AT8
E
630 635Right-handed 310
Helix 180
AT9
E
648 661Right-handed alpha
Helix 181
AU1
E
671 680Right-handed alpha
Helix 182
AU2
E
683 705Right-handed alpha
Helix 183
AU3
E
732 742Right-handed alpha
Helix 184
AU4
E
748 762Right-handed alpha
Helix 185
AU5
E
763 767Right-handed 310
Helix 186
AU6
F
42 48Right-handed alpha
Helix 187
AU7
F
62 64Right-handed 310
Helix 188
AU8
F
85 92Right-handed alpha
Helix 189
AU9
F
120 123Right-handed 310
Helix 190
AV1
F
129 134Right-handed alpha
Helix 191
AV2
F
134 140Right-handed alpha
Helix 192
AV3
F
202 206Right-handed 310
Helix 193
AV4
F
209 226Right-handed alpha
Helix 194
AV5
F
226 234Right-handed alpha
Helix 195
AV6
F
250 263Right-handed alpha
Helix 196
AV7
F
271 277Right-handed alpha
Helix 197
AV8
F
278 296Right-handed alpha
Helix 198
AV9
F
305 310Right-handed alpha
Helix 199
AW1
F
319 334Right-handed alpha
Helix 200
AW2
F
335 338Right-handed 310
Helix 201
AW3
F
354 359Right-handed 310
Helix 202
AW4
F
373 385Right-handed alpha
Helix 203
AW5
F
395 402Right-handed alpha
Helix 204
AW6
F
407 428Right-handed alpha
Helix 205
AW7
F
438 445Right-handed alpha
Helix 206
AW8
F
448 458Right-handed alpha
Helix 207
AW9
F
475 479Right-handed 310
Helix 208
AX1
F
482 499Right-handed alpha
Helix 209
AX2
F
499 507Right-handed alpha
Helix 210
AX3
F
523 535Right-handed alpha
Helix 211
AX4
F
544 548Right-handed alpha
Helix 212
AX5
F
553 569Right-handed alpha
Helix 213
AX6
F
579 588Right-handed alpha
Helix 214
AX7
F
596 611Right-handed alpha
Helix 215
AX8
F
630 635Right-handed 310
Helix 216
AX9
F
649 661Right-handed alpha
Helix 217
AY1
F
671 679Right-handed alpha
Helix 218
AY2
F
683 706Right-handed alpha
Helix 219
AY3
F
732 742Right-handed alpha
Helix 220
AY4
F
748 762Right-handed alpha
Helix 221
AY5
F
763 765Right-handed 310
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There are 30 sheets in PDB entry 5C18. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
25 29first strand
Strand 2
A
81 84parallel
Strand 3
A
39 41anti-parallel
Strand 4
A
66 73parallel
Strand 5
A
56 60anti-parallel
Strand 6
A
99 104anti-parallel
Strand 7
A
25 29anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
151 155first strand
Strand 2
A
160 168anti-parallel
Strand 3
A
113 118anti-parallel
Strand 4
A
181 184parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
144 147first strand
Strand 2
A
173 176anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
265 270first strand
Strand 2
A
299 304parallel
Strand 3
A
341 347parallel
Strand 4
A
240 244parallel
Strand 5
A
365 368parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
538 543first strand
Strand 2
A
572 577parallel
Strand 3
A
617 623parallel
Strand 4
A
513 517parallel
Strand 5
A
641 644parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
25 29first strand
Strand 2
B
81 84parallel
Strand 3
B
39 41anti-parallel
Strand 4
B
66 73parallel
Strand 5
B
56 60anti-parallel
Strand 6
B
99 104anti-parallel
Strand 7
B
25 29anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
151 155first strand
Strand 2
B
160 168anti-parallel
Strand 3
B
113 118anti-parallel
Strand 4
B
181 184parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
145 147first strand
Strand 2
B
173 175anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
265 270first strand
Strand 2
B
299 304parallel
Strand 3
B
341 347parallel
Strand 4
B
240 244parallel
Strand 5
B
365 368parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
538 543first strand
Strand 2
B
572 577parallel
Strand 3
B
617 623parallel
Strand 4
B
514 517parallel
Strand 5
B
641 644parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
25 29first strand
Strand 2
C
81 84parallel
Strand 3
C
39 41anti-parallel
Strand 4
C
66 73parallel
Strand 5
C
56 60anti-parallel
Strand 6
C
99 104anti-parallel
Strand 7
C
25 29anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
151 155first strand
Strand 2
C
160 168anti-parallel
Strand 3
C
113 118anti-parallel
Strand 4
C
181 183parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
144 147first strand
Strand 2
C
173 176anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
265 270first strand
Strand 2
C
299 304parallel
Strand 3
C
341 347parallel
Strand 4
C
240 244parallel
Strand 5
C
365 368parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
538 543first strand
Strand 2
C
572 577parallel
Strand 3
C
617 623parallel
Strand 4
C
513 517parallel
Strand 5
C
641 644parallel
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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
25 29first strand
Strand 2
D
81 84parallel
Strand 3
D
39 41anti-parallel
Strand 4
D
66 73parallel
Strand 5
D
56 60anti-parallel
Strand 6
D
99 104anti-parallel
Strand 7
D
25 29anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
151 155first strand
Strand 2
D
160 168anti-parallel
Strand 3
D
113 118anti-parallel
Strand 4
D
181 184parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
144 147first strand
Strand 2
D
173 176anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
265 270first strand
Strand 2
D
299 304parallel
Strand 3
D
341 347parallel
Strand 4
D
240 244parallel
Strand 5
D
365 368parallel
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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
538 543first strand
Strand 2
D
572 577parallel
Strand 3
D
618 623parallel
Strand 4
D
513 517parallel
Strand 5
D
641 644parallel
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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
39 40first strand
Strand 2
E
81 84anti-parallel
Strand 3
E
25 29parallel
Strand 4
E
99 104anti-parallel
Strand 5
E
56 60anti-parallel
Strand 6
E
66 70anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
151 155first strand
Strand 2
E
160 168anti-parallel
Strand 3
E
113 118anti-parallel
Strand 4
E
181 183parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
145 147first strand
Strand 2
E
173 175anti-parallel
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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
265 270first strand
Strand 2
E
299 304parallel
Strand 3
E
341 347parallel
Strand 4
E
240 244parallel
Strand 5
E
365 368parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
538 543first strand
Strand 2
E
572 577parallel
Strand 3
E
617 623parallel
Strand 4
E
513 517parallel
Strand 5
E
641 644parallel
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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
25 29first strand
Strand 2
F
81 84parallel
Strand 3
F
38 41anti-parallel
Strand 4
F
66 73parallel
Strand 5
F
56 60anti-parallel
Strand 6
F
99 104anti-parallel
Strand 7
F
25 29anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
151 155first strand
Strand 2
F
160 168anti-parallel
Strand 3
F
113 118anti-parallel
Strand 4
F
181 184parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
144 145first strand
Strand 2
F
175 176anti-parallel
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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
265 270first strand
Strand 2
F
299 304parallel
Strand 3
F
341 347parallel
Strand 4
F
240 244parallel
Strand 5
F
365 368parallel
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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
538 543first strand
Strand 2
F
572 577parallel
Strand 3
F
617 623parallel
Strand 4
F
513 517parallel
Strand 5
F
641 644parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il