Analysis of interatomic Contacts of Structural Units in PDB entry:
5C19

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5C19 entry

There are 2 chains in PDB entry 5C19 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 21	PRO 774
B	ASN 21	PHE 563

There are211 helices in PDB entry 5C19. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	49	Right-handed alpha
Helix 2	AA2	A	85	92	Right-handed alpha
Helix 3	AA3	A	129	134	Right-handed alpha
Helix 4	AA4	A	135	140	Right-handed alpha
Helix 5	AA5	A	202	206	Right-handed 310
Helix 6	AA6	A	209	226	Right-handed alpha
Helix 7	AA7	A	226	232	Right-handed alpha
Helix 8	AA8	A	250	262	Right-handed alpha
Helix 9	AA9	A	270	276	Right-handed alpha
Helix 10	AB1	A	280	295	Right-handed alpha
Helix 11	AB2	A	307	309	Right-handed 310
Helix 12	AB3	A	318	334	Right-handed alpha
Helix 13	AB4	A	349	353	Right-handed 310
Helix 14	AB5	A	373	384	Right-handed alpha
Helix 15	AB6	A	395	402	Right-handed alpha
Helix 16	AB7	A	407	424	Right-handed alpha
Helix 17	AB8	A	425	430	Right-handed 310
Helix 18	AB9	A	438	444	Right-handed alpha
Helix 19	AC1	A	448	458	Right-handed alpha
Helix 20	AC2	A	475	479	Right-handed 310
Helix 21	AC3	A	482	491	Right-handed alpha
Helix 22	AC4	A	494	499	Right-handed alpha
Helix 23	AC5	A	499	507	Right-handed alpha
Helix 24	AC6	A	523	536	Right-handed alpha
Helix 25	AC7	A	544	553	Right-handed alpha
Helix 26	AC8	A	557	568	Right-handed alpha
Helix 27	AC9	A	580	586	Right-handed alpha
Helix 28	AD1	A	598	610	Right-handed alpha
Helix 29	AD2	A	625	629	Right-handed 310
Helix 30	AD3	A	652	661	Right-handed alpha
Helix 31	AD4	A	671	679	Right-handed alpha
Helix 32	AD5	A	683	706	Right-handed alpha
Helix 33	AD6	A	733	738	Right-handed alpha
Helix 34	AD7	A	748	763	Right-handed alpha
Helix 35	AD8	B	42	49	Right-handed alpha
Helix 36	AD9	B	85	92	Right-handed alpha
Helix 37	AE1	B	120	123	Right-handed 310
Helix 38	AE2	B	129	134	Right-handed alpha
Helix 39	AE3	B	134	139	Right-handed alpha
Helix 40	AE4	B	202	206	Right-handed 310
Helix 41	AE5	B	209	226	Right-handed alpha
Helix 42	AE6	B	226	233	Right-handed alpha
Helix 43	AE7	B	250	263	Right-handed alpha
Helix 44	AE8	B	270	277	Right-handed alpha
Helix 45	AE9	B	280	296	Right-handed alpha
Helix 46	AF1	B	307	309	Right-handed 310
Helix 47	AF2	B	318	334	Right-handed alpha
Helix 48	AF3	B	349	353	Right-handed 310
Helix 49	AF4	B	354	358	Right-handed 310
Helix 50	AF5	B	373	385	Right-handed alpha
Helix 51	AF6	B	395	402	Right-handed alpha
Helix 52	AF7	B	407	424	Right-handed alpha
Helix 53	AF8	B	426	431	Right-handed alpha
Helix 54	AF9	B	438	444	Right-handed alpha
Helix 55	AG1	B	448	458	Right-handed alpha
Helix 56	AG2	B	475	479	Right-handed 310
Helix 57	AG3	B	482	494	Right-handed alpha
Helix 58	AG4	B	494	499	Right-handed alpha
Helix 59	AG5	B	499	507	Right-handed alpha
Helix 60	AG6	B	523	536	Right-handed alpha
Helix 61	AG7	B	543	553	Right-handed alpha
Helix 62	AG8	B	557	568	Right-handed alpha
Helix 63	AG9	B	580	586	Right-handed alpha
Helix 64	AH1	B	598	611	Right-handed alpha
Helix 65	AH2	B	625	629	Right-handed 310
Helix 66	AH3	B	630	635	Right-handed 310
Helix 67	AH4	B	649	661	Right-handed alpha
Helix 68	AH5	B	672	677	Right-handed alpha
Helix 69	AH6	B	683	707	Right-handed alpha
Helix 70	AH7	B	732	740	Right-handed alpha
Helix 71	AH8	B	741	743	Right-handed 310
Helix 72	AH9	B	748	763	Right-handed alpha
Helix 73	AI1	C	42	49	Right-handed alpha
Helix 74	AI2	C	85	92	Right-handed alpha
Helix 75	AI3	C	120	123	Right-handed 310
Helix 76	AI4	C	129	134	Right-handed alpha
Helix 77	AI5	C	134	140	Right-handed alpha
Helix 78	AI6	C	202	206	Right-handed 310
Helix 79	AI7	C	209	226	Right-handed alpha
Helix 80	AI8	C	226	233	Right-handed alpha
Helix 81	AI9	C	250	263	Right-handed alpha
Helix 82	AJ1	C	270	277	Right-handed alpha
Helix 83	AJ2	C	280	296	Right-handed alpha
Helix 84	AJ3	C	307	309	Right-handed 310
Helix 85	AJ4	C	318	334	Right-handed alpha
Helix 86	AJ5	C	349	353	Right-handed 310
Helix 87	AJ6	C	354	358	Right-handed 310
Helix 88	AJ7	C	373	385	Right-handed alpha
Helix 89	AJ8	C	395	402	Right-handed alpha
Helix 90	AJ9	C	407	424	Right-handed alpha
Helix 91	AK1	C	426	431	Right-handed alpha
Helix 92	AK2	C	439	445	Right-handed alpha
Helix 93	AK3	C	448	458	Right-handed alpha
Helix 94	AK4	C	475	479	Right-handed 310
Helix 95	AK5	C	482	494	Right-handed alpha
Helix 96	AK6	C	494	499	Right-handed alpha
Helix 97	AK7	C	499	507	Right-handed alpha
Helix 98	AK8	C	523	536	Right-handed alpha
Helix 99	AK9	C	543	553	Right-handed alpha
Helix 100	AL1	C	557	568	Right-handed alpha
Helix 101	AL2	C	580	586	Right-handed alpha
Helix 102	AL3	C	598	611	Right-handed alpha
Helix 103	AL4	C	625	629	Right-handed 310
Helix 104	AL5	C	630	635	Right-handed 310
Helix 105	AL6	C	649	661	Right-handed alpha
Helix 106	AL7	C	672	679	Right-handed alpha
Helix 107	AL8	C	683	707	Right-handed alpha
Helix 108	AL9	C	732	740	Right-handed alpha
Helix 109	AM1	C	741	743	Right-handed 310
Helix 110	AM2	C	748	763	Right-handed alpha
Helix 111	AM3	D	209	226	Right-handed alpha
Helix 112	AM4	D	227	231	Right-handed 310
Helix 113	AM5	D	250	260	Right-handed alpha
Helix 114	AM6	D	270	275	Right-handed alpha
Helix 115	AM7	D	280	294	Right-handed alpha
Helix 116	AM8	D	319	334	Right-handed alpha
Helix 117	AM9	D	373	385	Right-handed alpha
Helix 118	AN1	D	395	402	Right-handed alpha
Helix 119	AN2	D	407	424	Right-handed alpha
Helix 120	AN3	D	426	431	Right-handed alpha
Helix 121	AN4	D	448	458	Right-handed alpha
Helix 122	AN5	D	475	479	Right-handed 310
Helix 123	AN6	D	482	499	Right-handed alpha
Helix 124	AN7	D	501	506	Right-handed alpha
Helix 125	AN8	D	523	536	Right-handed alpha
Helix 126	AN9	D	544	552	Right-handed alpha
Helix 127	AO1	D	557	568	Right-handed alpha
Helix 128	AO2	D	579	587	Right-handed alpha
Helix 129	AO3	D	598	609	Right-handed alpha
Helix 130	AO4	D	625	629	Right-handed 310
Helix 131	AO5	D	630	634	Right-handed 310
Helix 132	AO6	D	649	661	Right-handed alpha
Helix 133	AO7	D	671	675	Right-handed 310
Helix 134	AO8	D	683	707	Right-handed alpha
Helix 135	AO9	D	732	739	Right-handed alpha
Helix 136	AP1	D	748	753	Right-handed alpha
Helix 137	AP2	E	42	49	Right-handed alpha
Helix 138	AP3	E	85	92	Right-handed alpha
Helix 139	AP4	E	120	123	Right-handed 310
Helix 140	AP5	E	129	134	Right-handed alpha
Helix 141	AP6	E	134	139	Right-handed alpha
Helix 142	AP7	E	202	206	Right-handed 310
Helix 143	AP8	E	209	226	Right-handed alpha
Helix 144	AP9	E	226	233	Right-handed alpha
Helix 145	AQ1	E	250	263	Right-handed alpha
Helix 146	AQ2	E	270	277	Right-handed alpha
Helix 147	AQ3	E	280	296	Right-handed alpha
Helix 148	AQ4	E	307	309	Right-handed 310
Helix 149	AQ5	E	318	334	Right-handed alpha
Helix 150	AQ6	E	349	353	Right-handed 310
Helix 151	AQ7	E	354	358	Right-handed 310
Helix 152	AQ8	E	373	385	Right-handed alpha
Helix 153	AQ9	E	395	402	Right-handed alpha
Helix 154	AR1	E	407	424	Right-handed alpha
Helix 155	AR2	E	426	431	Right-handed alpha
Helix 156	AR3	E	439	445	Right-handed alpha
Helix 157	AR4	E	448	458	Right-handed alpha
Helix 158	AR5	E	475	479	Right-handed 310
Helix 159	AR6	E	483	493	Right-handed alpha
Helix 160	AR7	E	494	499	Right-handed alpha
Helix 161	AR8	E	499	507	Right-handed alpha
Helix 162	AR9	E	523	536	Right-handed alpha
Helix 163	AS1	E	543	553	Right-handed alpha
Helix 164	AS2	E	557	568	Right-handed alpha
Helix 165	AS3	E	580	586	Right-handed alpha
Helix 166	AS4	E	598	611	Right-handed alpha
Helix 167	AS5	E	625	629	Right-handed 310
Helix 168	AS6	E	630	635	Right-handed 310
Helix 169	AS7	E	649	661	Right-handed alpha
Helix 170	AS8	E	672	679	Right-handed alpha
Helix 171	AS9	E	683	707	Right-handed alpha
Helix 172	AT1	E	732	740	Right-handed alpha
Helix 173	AT2	E	741	743	Right-handed 310
Helix 174	AT3	E	748	763	Right-handed alpha
Helix 175	AT4	F	42	49	Right-handed alpha
Helix 176	AT5	F	85	92	Right-handed alpha
Helix 177	AT6	F	120	123	Right-handed 310
Helix 178	AT7	F	129	134	Right-handed alpha
Helix 179	AT8	F	134	139	Right-handed alpha
Helix 180	AT9	F	202	206	Right-handed 310
Helix 181	AU1	F	209	226	Right-handed alpha
Helix 182	AU2	F	226	233	Right-handed alpha
Helix 183	AU3	F	250	263	Right-handed alpha
Helix 184	AU4	F	270	277	Right-handed alpha
Helix 185	AU5	F	280	296	Right-handed alpha
Helix 186	AU6	F	307	309	Right-handed 310
Helix 187	AU7	F	318	334	Right-handed alpha
Helix 188	AU8	F	349	353	Right-handed 310
Helix 189	AU9	F	354	359	Right-handed 310
Helix 190	AV1	F	373	385	Right-handed alpha
Helix 191	AV2	F	395	402	Right-handed alpha
Helix 192	AV3	F	407	424	Right-handed alpha
Helix 193	AV4	F	426	431	Right-handed alpha
Helix 194	AV5	F	439	444	Right-handed alpha
Helix 195	AV6	F	448	458	Right-handed alpha
Helix 196	AV7	F	475	479	Right-handed 310
Helix 197	AV8	F	482	494	Right-handed alpha
Helix 198	AV9	F	494	499	Right-handed alpha
Helix 199	AW1	F	499	507	Right-handed alpha
Helix 200	AW2	F	523	536	Right-handed alpha
Helix 201	AW3	F	543	553	Right-handed alpha
Helix 202	AW4	F	557	568	Right-handed alpha
Helix 203	AW5	F	580	586	Right-handed alpha
Helix 204	AW6	F	598	611	Right-handed alpha
Helix 205	AW7	F	625	629	Right-handed 310
Helix 206	AW8	F	649	661	Right-handed alpha
Helix 207	AW9	F	672	677	Right-handed alpha
Helix 208	AX1	F	683	707	Right-handed alpha
Helix 209	AX2	F	732	740	Right-handed alpha
Helix 210	AX3	F	741	743	Right-handed 310
Helix 211	AX4	F	748	763	Right-handed alpha

There are 31 sheets in PDB entry 5C19. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	67	first strand
Strand 2	A	57	61	anti-parallel
Strand 3	A	99	104	anti-parallel
Strand 4	A	25	29	anti-parallel
Strand 5	A	81	83	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	71	73	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	156	first strand
Strand 2	A	159	168	anti-parallel
Strand 3	A	113	118	anti-parallel
Strand 4	A	181	183	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	147	first strand
Strand 2	A	173	175	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	269	first strand
Strand 2	A	299	305	parallel
Strand 3	A	341	346	parallel
Strand 4	A	240	243	parallel
Strand 5	A	365	367	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	470	first strand
Strand 2	A	538	541	anti-parallel
Strand 3	A	572	576	parallel
Strand 4	A	618	623	parallel
Strand 5	A	513	517	parallel
Strand 6	A	639	644	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	29	first strand
Strand 2	B	81	83	parallel
Strand 3	B	39	41	anti-parallel
Strand 4	B	66	73	parallel
Strand 5	B	56	60	anti-parallel
Strand 6	B	99	104	anti-parallel
Strand 7	B	25	29	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	156	first strand
Strand 2	B	159	168	anti-parallel
Strand 3	B	113	118	anti-parallel
Strand 4	B	181	184	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	147	first strand
Strand 2	B	173	176	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	269	first strand
Strand 2	B	299	305	parallel
Strand 3	B	341	346	parallel
Strand 4	B	240	243	parallel
Strand 5	B	363	367	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	572	576	parallel
Strand 3	B	617	623	parallel
Strand 4	B	513	517	parallel
Strand 5	B	641	644	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	29	first strand
Strand 2	C	81	83	parallel
Strand 3	C	38	41	anti-parallel
Strand 4	C	66	73	parallel
Strand 5	C	56	60	anti-parallel
Strand 6	C	99	104	anti-parallel
Strand 7	C	25	29	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	156	first strand
Strand 2	C	159	168	anti-parallel
Strand 3	C	113	118	anti-parallel
Strand 4	C	181	183	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	437	438	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	147	first strand
Strand 2	C	173	175	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	269	first strand
Strand 2	C	299	305	parallel
Strand 3	C	341	346	parallel
Strand 4	C	240	243	parallel
Strand 5	C	365	367	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	469	470	first strand
Strand 2	C	538	542	anti-parallel
Strand 3	C	572	576	parallel
Strand 4	C	617	623	parallel
Strand 5	C	513	517	parallel
Strand 6	C	641	644	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	269	first strand
Strand 2	D	299	305	parallel
Strand 3	D	341	346	parallel
Strand 4	D	240	243	parallel
Strand 5	D	365	367	parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	469	470	first strand
Strand 2	D	538	542	anti-parallel
Strand 3	D	572	576	parallel
Strand 4	D	617	622	parallel
Strand 5	D	513	517	parallel
Strand 6	D	643	644	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	25	29	first strand
Strand 2	E	81	83	parallel
Strand 3	E	38	41	anti-parallel
Strand 4	E	66	73	parallel
Strand 5	E	56	60	anti-parallel
Strand 6	E	99	104	anti-parallel
Strand 7	E	25	29	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	151	156	first strand
Strand 2	E	159	168	anti-parallel
Strand 3	E	113	118	anti-parallel
Strand 4	E	181	184	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	127	first strand
Strand 2	E	437	438	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	147	first strand
Strand 2	E	173	175	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	269	first strand
Strand 2	E	299	305	parallel
Strand 3	E	341	346	parallel
Strand 4	E	240	243	parallel
Strand 5	E	365	367	parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	469	470	first strand
Strand 2	E	538	542	anti-parallel
Strand 3	E	572	576	parallel
Strand 4	E	617	623	parallel
Strand 5	E	513	517	parallel
Strand 6	E	641	644	parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	25	29	first strand
Strand 2	F	81	84	parallel
Strand 3	F	39	41	anti-parallel
Strand 4	F	66	73	parallel
Strand 5	F	56	60	anti-parallel
Strand 6	F	99	104	anti-parallel
Strand 7	F	25	29	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	151	156	first strand
Strand 2	F	159	168	anti-parallel
Strand 3	F	113	118	anti-parallel
Strand 4	F	181	183	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	127	first strand
Strand 2	F	437	438	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	145	147	first strand
Strand 2	F	173	175	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	265	269	first strand
Strand 2	F	299	305	parallel
Strand 3	F	341	346	parallel
Strand 4	F	240	243	parallel
Strand 5	F	365	367	parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	538	542	first strand
Strand 2	F	572	576	parallel
Strand 3	F	617	623	parallel
Strand 4	F	513	517	parallel
Strand 5	F	641	644	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5C19

Analysis of interatomic Contacts of Structural Units in PDB entry:
5C19