Analysis of interatomic Contacts of Structural Units in PDB entry:
5C2K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C2K entry

There is 1 chain in PDB entry 5C2K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2VAL 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5C2K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 28Right-handed alpha
Helix 2
AA2
A
63 67Right-handed 310
Helix 3
AA3
A
69 74Right-handed 310
Helix 4
AA4
A
88 98Right-handed alpha
Helix 5
AA5
A
98 107Right-handed alpha
Helix 6
AA6
A
118 122Right-handed 310
Helix 7
AA7
A
124 133Right-handed alpha
Helix 8
AA8
A
140 152Right-handed alpha
Helix 9
AA9
A
166 183Right-handed alpha
Helix 10
AB1
A
212 216Right-handed 310
Helix 11
AB2
A
225 239Right-handed alpha
Helix 12
AB3
A
251 266Right-handed alpha
Helix 13
AB4
A
270 274Right-handed 310
Helix 14
AB5
A
276 290Right-handed alpha
Helix 15
AB6
A
300 310Right-handed alpha
Helix 16
AB7
A
312 327Right-handed alpha
Helix 17
AB8
A
328 348Right-handed alpha
Helix 18
AB9
A
354 367Right-handed alpha
Helix 19
AC1
A
375 383Right-handed alpha
Helix 20
AC2
A
384 395Right-handed alpha
Helix 21
AC3
A
397 404Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5C2K.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 48first strand
Strand 2
A
51 60anti-parallel
Strand 3
A
4 12parallel
Strand 4
A
79 85parallel
Strand 5
A
112 117parallel
Strand 6
A
155 158parallel
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