Analysis of interatomic Contacts of Structural Units in PDB entry:
5C3U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C3U entry

There is 1 chain in PDB entry 5C3U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 16MET 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5C3U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 35Right-handed alpha
Helix 2
AA2
A
44 50Right-handed 310
Helix 3
AA3
A
51 68Right-handed alpha
Helix 4
AA4
A
78 93Right-handed alpha
Helix 5
AA5
A
105 115Right-handed alpha
Helix 6
AA6
A
125 135Right-handed alpha
Helix 7
AA7
A
149 167Right-handed alpha
Helix 8
AA8
A
182 195Right-handed alpha
Helix 9
AA9
A
211 220Right-handed alpha
Helix 10
AB1
A
232 236Right-handed 310
Helix 11
AB2
A
241 251Right-handed alpha
Helix 12
AB3
A
259 275Right-handed alpha
Helix 13
AB4
A
279 291Right-handed alpha
Helix 14
AB5
A
292 298Right-handed alpha
Helix 15
AB6
A
318 330Right-handed alpha
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There are 2 sheets in PDB entry 5C3U. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
37 42anti-parallel
Strand 3
A
306 311parallel
Strand 4
A
174 178parallel
Strand 5
A
202 207parallel
Strand 6
A
253 258parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 121first strand
Strand 2
A
95 100parallel
Strand 3
A
72 75parallel
Strand 4
A
141 143parallel
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