Analysis of interatomic Contacts of Structural Units in PDB entry:
5C5S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C5S entry

There are 4 chains in PDB entry 5C5S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 109GLU 318
B
 PRO 114ALA 319
C
 VAL 112ALA 319
D
 HIS 116GLU 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 5C5S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 125Right-handed 310
Helix 2
AA2
A
132 146Right-handed alpha
Helix 3
AA3
A
158 172Right-handed alpha
Helix 4
AA4
A
177 181Right-handed 310
Helix 5
AA5
A
182 196Right-handed alpha
Helix 6
AA6
A
206 215Right-handed alpha
Helix 7
AA7
A
218 231Right-handed alpha
Helix 8
AA8
A
234 254Right-handed alpha
Helix 9
AA9
A
254 259Right-handed alpha
Helix 10
AB1
A
261 274Right-handed alpha
Helix 11
AB2
A
284 315Right-handed alpha
Helix 12
AB3
B
120 125Right-handed 310
Helix 13
AB4
B
132 146Right-handed alpha
Helix 14
AB5
B
158 171Right-handed alpha
Helix 15
AB6
B
172 176Right-handed 310
Helix 16
AB7
B
177 181Right-handed 310
Helix 17
AB8
B
182 196Right-handed alpha
Helix 18
AB9
B
206 215Right-handed alpha
Helix 19
AC1
B
218 231Right-handed alpha
Helix 20
AC2
B
234 254Right-handed alpha
Helix 21
AC3
B
254 259Right-handed alpha
Helix 22
AC4
B
261 274Right-handed alpha
Helix 23
AC5
B
287 315Right-handed alpha
Helix 24
AC6
C
120 124Right-handed 310
Helix 25
AC7
C
132 146Right-handed alpha
Helix 26
AC8
C
158 172Right-handed alpha
Helix 27
AC9
C
177 181Right-handed 310
Helix 28
AD1
C
182 196Right-handed alpha
Helix 29
AD2
C
206 215Right-handed alpha
Helix 30
AD3
C
218 231Right-handed alpha
Helix 31
AD4
C
234 254Right-handed alpha
Helix 32
AD5
C
254 259Right-handed alpha
Helix 33
AD6
C
261 274Right-handed alpha
Helix 34
AD7
C
288 316Right-handed alpha
Helix 35
AD8
D
120 125Right-handed 310
Helix 36
AD9
D
132 146Right-handed alpha
Helix 37
AE1
D
158 172Right-handed alpha
Helix 38
AE2
D
177 181Right-handed 310
Helix 39
AE3
D
182 196Right-handed alpha
Helix 40
AE4
D
206 215Right-handed alpha
Helix 41
AE5
D
218 231Right-handed alpha
Helix 42
AE6
D
234 253Right-handed alpha
Helix 43
AE7
D
254 259Right-handed alpha
Helix 44
AE8
D
261 274Right-handed alpha
Helix 45
AE9
D
287 315Right-handed alpha
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There are no sheets in PDB entry 5C5S
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il