Analysis of interatomic Contacts of Structural Units in PDB entry:
5C65


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C65 entry

There are 2 chains in PDB entry 5C65 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5ALA 469
B
 VAL 6ALA 469
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 5C65. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 18Right-handed alpha
Helix 2
AA2
A
18 31Right-handed alpha
Helix 3
AA3
A
34 48Right-handed alpha
Helix 4
AA4
A
55 80Right-handed alpha
Helix 5
AA5
A
81 83Right-handed 310
Helix 6
AA6
A
84 89Right-handed alpha
Helix 7
AA7
A
89 97Right-handed alpha
Helix 8
AA8
A
97 111Right-handed alpha
Helix 9
AA9
A
116 146Right-handed alpha
Helix 10
AB1
A
147 149Right-handed 310
Helix 11
AB2
A
150 173Right-handed alpha
Helix 12
AB3
A
183 190Right-handed alpha
Helix 13
AB4
A
191 202Right-handed alpha
Helix 14
AB5
A
203 205Right-handed 310
Helix 15
AB6
A
208 215Right-handed alpha
Helix 16
AB7
A
218 231Right-handed alpha
Helix 17
AB8
A
235 252Right-handed alpha
Helix 18
AB9
A
258 263Right-handed alpha
Helix 19
AC1
A
263 282Right-handed alpha
Helix 20
AC2
A
284 299Right-handed alpha
Helix 21
AC3
A
305 324Right-handed alpha
Helix 22
AC4
A
330 357Right-handed alpha
Helix 23
AC5
A
363 380Right-handed alpha
Helix 24
AC6
A
383 393Right-handed alpha
Helix 25
AC7
A
397 428Right-handed alpha
Helix 26
AC8
A
430 450Right-handed alpha
Helix 27
AC9
A
457 469Right-handed alpha
Helix 28
AD1
B
7 18Right-handed alpha
Helix 29
AD2
B
18 31Right-handed alpha
Helix 30
AD3
B
34 48Right-handed alpha
Helix 31
AD4
B
55 80Right-handed alpha
Helix 32
AD5
B
81 83Right-handed 310
Helix 33
AD6
B
84 89Right-handed alpha
Helix 34
AD7
B
89 111Right-handed alpha
Helix 35
AD8
B
116 146Right-handed alpha
Helix 36
AD9
B
147 149Right-handed 310
Helix 37
AE1
B
150 156Right-handed alpha
Helix 38
AE2
B
156 173Right-handed alpha
Helix 39
AE3
B
183 190Right-handed alpha
Helix 40
AE4
B
191 202Right-handed alpha
Helix 41
AE5
B
203 205Right-handed 310
Helix 42
AE6
B
208 215Right-handed alpha
Helix 43
AE7
B
218 231Right-handed alpha
Helix 44
AE8
B
235 250Right-handed alpha
Helix 45
AE9
B
258 263Right-handed alpha
Helix 46
AF1
B
263 282Right-handed alpha
Helix 47
AF2
B
284 299Right-handed alpha
Helix 48
AF3
B
304 324Right-handed alpha
Helix 49
AF4
B
325 330Right-handed alpha
Helix 50
AF5
B
330 357Right-handed alpha
Helix 51
AF6
B
365 380Right-handed alpha
Helix 52
AF7
B
383 393Right-handed alpha
Helix 53
AF8
B
397 428Right-handed alpha
Helix 54
AF9
B
430 450Right-handed alpha
Helix 55
AG1
B
457 469Right-handed alpha
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There are no sheets in PDB entry 5C65
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il