Analysis of interatomic Contacts of Structural Units in PDB entry:
5C6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C6G entry

There are 4 chains in PDB entry 5C6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 34ASN 652
B
 THR 3SER 130
C
 MET 34ASN 652
D
 THR 3ILE 128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 5C6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 43Right-handed alpha
Helix 2
AA2
A
43 63Right-handed alpha
Helix 3
AA3
A
64 66Right-handed 310
Helix 4
AA4
A
68 93Right-handed alpha
Helix 5
AA5
A
96 115Right-handed alpha
Helix 6
AA6
A
117 134Right-handed alpha
Helix 7
AA7
A
137 150Right-handed alpha
Helix 8
AA8
A
150 156Right-handed alpha
Helix 9
AA9
A
158 176Right-handed alpha
Helix 10
AB1
A
180 196Right-handed alpha
Helix 11
AB2
A
200 217Right-handed alpha
Helix 12
AB3
A
220 239Right-handed alpha
Helix 13
AB4
A
243 252Right-handed alpha
Helix 14
AB5
A
253 255Right-handed 310
Helix 15
AB6
A
261 279Right-handed alpha
Helix 16
AB7
A
283 297Right-handed alpha
Helix 17
AB8
A
326 343Right-handed alpha
Helix 18
AB9
A
344 346Right-handed 310
Helix 19
AC1
A
352 371Right-handed alpha
Helix 20
AC2
A
377 407Right-handed alpha
Helix 21
AC3
A
419 433Right-handed alpha
Helix 22
AC4
A
438 451Right-handed alpha
Helix 23
AC5
A
454 476Right-handed alpha
Helix 24
AC6
A
479 503Right-handed alpha
Helix 25
AC7
A
504 508Right-handed 310
Helix 26
AC8
A
509 523Right-handed alpha
Helix 27
AC9
A
539 557Right-handed alpha
Helix 28
AD1
A
574 589Right-handed alpha
Helix 29
AD2
A
592 610Right-handed alpha
Helix 30
AD3
A
612 630Right-handed alpha
Helix 31
AD4
A
632 652Right-handed alpha
Helix 32
AD5
B
14 20Right-handed alpha
Helix 33
AD6
B
30 36Right-handed alpha
Helix 34
AD7
B
57 63Right-handed 310
Helix 35
AD8
B
98 102Right-handed 310
Helix 36
AD9
B
106 113Right-handed alpha
Helix 37
AE1
B
120 122Right-handed 310
Helix 38
AE2
C
35 43Right-handed alpha
Helix 39
AE3
C
43 64Right-handed alpha
Helix 40
AE4
C
68 93Right-handed alpha
Helix 41
AE5
C
96 115Right-handed alpha
Helix 42
AE6
C
117 134Right-handed alpha
Helix 43
AE7
C
137 150Right-handed alpha
Helix 44
AE8
C
150 156Right-handed alpha
Helix 45
AE9
C
158 164Right-handed alpha
Helix 46
AF1
C
164 174Right-handed alpha
Helix 47
AF2
C
180 196Right-handed alpha
Helix 48
AF3
C
201 217Right-handed alpha
Helix 49
AF4
C
220 239Right-handed alpha
Helix 50
AF5
C
243 253Right-handed alpha
Helix 51
AF6
C
264 279Right-handed alpha
Helix 52
AF7
C
283 297Right-handed alpha
Helix 53
AF8
C
297 303Right-handed alpha
Helix 54
AF9
C
326 342Right-handed alpha
Helix 55
AG1
C
352 371Right-handed alpha
Helix 56
AG2
C
377 407Right-handed alpha
Helix 57
AG3
C
419 433Right-handed alpha
Helix 58
AG4
C
438 449Right-handed alpha
Helix 59
AG5
C
450 452Right-handed 310
Helix 60
AG6
C
455 475Right-handed alpha
Helix 61
AG7
C
480 503Right-handed alpha
Helix 62
AG8
C
504 508Right-handed 310
Helix 63
AG9
C
509 522Right-handed alpha
Helix 64
AH1
C
540 558Right-handed alpha
Helix 65
AH2
C
575 589Right-handed alpha
Helix 66
AH3
C
592 607Right-handed alpha
Helix 67
AH4
C
612 631Right-handed alpha
Helix 68
AH5
C
632 652Right-handed alpha
Helix 69
AH6
D
14 20Right-handed alpha
Helix 70
AH7
D
30 35Right-handed alpha
Helix 71
AH8
D
57 63Right-handed 310
Helix 72
AH9
D
98 102Right-handed 310
Helix 73
AI1
D
106 114Right-handed alpha
Helix 74
AI2
D
120 122Right-handed 310
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There are 4 sheets in PDB entry 5C6G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 313first strand
Strand 2
A
316 321anti-parallel
Strand 3
B
42 47anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 83first strand
Strand 2
B
124 125parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
307 313first strand
Strand 2
C
316 321anti-parallel
Strand 3
D
44 47anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 83first strand
Strand 2
D
124 125parallel
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