Analysis of interatomic Contacts of Structural Units in PDB entry:
5C6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C6H entry

There are 24 chains in PDB entry 5C6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 171GLU 325
B
 PRO 1SER 25
C
 GLU 171GLU 325
D
 PRO 1LEU 26
E
 GLU 171LEU 324
F
 PRO 1LEU 26
G
 GLU 171LEU 324
H
 PRO 1LEU 26
I
 GLU 171GLU 325
J
 PRO 1ARG 24
K
 GLU 171ASP 323
L
 PRO 1LEU 26
M
 GLU 171GLU 325
N
 PRO 1LEU 26
O
 GLU 171GLU 325
P
 PRO 1LEU 26
Q
 GLU 171LEU 324
R
 PRO 1ARG 24
S
 GLU 171LEU 324
T
 PRO 1LEU 26
U
 GLU 171VAL 321
V
 GLY 2ARG 24
W
 GLU 171ASP 323
X
 PRO 1SER 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 5C6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
174 192Right-handed alpha
Helix 2
AA2
A
203 224Right-handed alpha
Helix 3
AA3
A
224 236Right-handed alpha
Helix 4
AA4
A
239 241Right-handed 310
Helix 5
AA5
A
242 254Right-handed alpha
Helix 6
AA6
A
260 281Right-handed alpha
Helix 7
AA7
A
283 285Right-handed 310
Helix 8
AA8
A
286 309Right-handed alpha
Helix 9
AA9
A
310 319Right-handed alpha
Helix 10
AB1
B
7 24Right-handed alpha
Helix 11
AB2
C
172 192Right-handed alpha
Helix 12
AB3
C
203 224Right-handed alpha
Helix 13
AB4
C
224 236Right-handed alpha
Helix 14
AB5
C
239 241Right-handed 310
Helix 15
AB6
C
242 253Right-handed alpha
Helix 16
AB7
C
260 281Right-handed alpha
Helix 17
AB8
C
283 285Right-handed 310
Helix 18
AB9
C
286 309Right-handed alpha
Helix 19
AC1
C
312 319Right-handed alpha
Helix 20
AC2
D
4 24Right-handed alpha
Helix 21
AC3
E
172 192Right-handed alpha
Helix 22
AC4
E
204 224Right-handed alpha
Helix 23
AC5
E
224 236Right-handed alpha
Helix 24
AC6
E
239 241Right-handed 310
Helix 25
AC7
E
242 254Right-handed alpha
Helix 26
AC8
E
260 281Right-handed alpha
Helix 27
AC9
E
283 285Right-handed 310
Helix 28
AD1
E
286 309Right-handed alpha
Helix 29
AD2
E
310 319Right-handed alpha
Helix 30
AD3
F
4 22Right-handed alpha
Helix 31
AD4
G
172 192Right-handed alpha
Helix 32
AD5
G
202 236Right-handed alpha
Helix 33
AD6
G
239 244Right-handed alpha
Helix 34
AD7
G
244 253Right-handed alpha
Helix 35
AD8
G
260 281Right-handed alpha
Helix 36
AD9
G
283 285Right-handed 310
Helix 37
AE1
G
286 309Right-handed alpha
Helix 38
AE2
G
310 319Right-handed alpha
Helix 39
AE3
H
4 24Right-handed alpha
Helix 40
AE4
I
172 192Right-handed alpha
Helix 41
AE5
I
202 236Right-handed alpha
Helix 42
AE6
I
239 241Right-handed 310
Helix 43
AE7
I
242 253Right-handed alpha
Helix 44
AE8
I
260 281Right-handed alpha
Helix 45
AE9
I
283 285Right-handed 310
Helix 46
AF1
I
286 309Right-handed alpha
Helix 47
AF2
I
310 319Right-handed alpha
Helix 48
AF3
J
4 20Right-handed alpha
Helix 49
AF4
K
172 192Right-handed alpha
Helix 50
AF5
K
202 236Right-handed alpha
Helix 51
AF6
K
239 241Right-handed 310
Helix 52
AF7
K
242 254Right-handed alpha
Helix 53
AF8
K
260 281Right-handed alpha
Helix 54
AF9
K
283 285Right-handed 310
Helix 55
AG1
K
286 302Right-handed alpha
Helix 56
AG2
K
302 309Right-handed alpha
Helix 57
AG3
K
310 319Right-handed alpha
Helix 58
AG4
L
5 23Right-handed alpha
Helix 59
AG5
M
172 192Right-handed alpha
Helix 60
AG6
M
203 224Right-handed alpha
Helix 61
AG7
M
224 236Right-handed alpha
Helix 62
AG8
M
239 242Right-handed 310
Helix 63
AG9
M
243 254Right-handed alpha
Helix 64
AH1
M
260 281Right-handed alpha
Helix 65
AH2
M
283 285Right-handed 310
Helix 66
AH3
M
286 309Right-handed alpha
Helix 67
AH4
M
310 319Right-handed alpha
Helix 68
AH5
N
5 24Right-handed alpha
Helix 69
AH6
O
172 192Right-handed alpha
Helix 70
AH7
O
202 224Right-handed alpha
Helix 71
AH8
O
224 236Right-handed alpha
Helix 72
AH9
O
239 242Right-handed 310
Helix 73
AI1
O
243 254Right-handed alpha
Helix 74
AI2
O
260 281Right-handed alpha
Helix 75
AI3
O
283 285Right-handed 310
Helix 76
AI4
O
286 309Right-handed alpha
Helix 77
AI5
O
310 319Right-handed alpha
Helix 78
AI6
P
4 24Right-handed alpha
Helix 79
AI7
Q
172 192Right-handed alpha
Helix 80
AI8
Q
204 224Right-handed alpha
Helix 81
AI9
Q
224 236Right-handed alpha
Helix 82
AJ1
Q
239 254Right-handed alpha
Helix 83
AJ2
Q
260 281Right-handed alpha
Helix 84
AJ3
Q
283 285Right-handed 310
Helix 85
AJ4
Q
286 309Right-handed alpha
Helix 86
AJ5
Q
310 320Right-handed alpha
Helix 87
AJ6
R
5 23Right-handed alpha
Helix 88
AJ7
S
172 192Right-handed alpha
Helix 89
AJ8
S
202 224Right-handed alpha
Helix 90
AJ9
S
224 236Right-handed alpha
Helix 91
AK1
S
239 242Right-handed 310
Helix 92
AK2
S
243 254Right-handed alpha
Helix 93
AK3
S
260 281Right-handed alpha
Helix 94
AK4
S
283 285Right-handed 310
Helix 95
AK5
S
286 309Right-handed alpha
Helix 96
AK6
S
310 319Right-handed alpha
Helix 97
AK7
T
4 24Right-handed alpha
Helix 98
AK8
U
172 192Right-handed alpha
Helix 99
AK9
U
202 236Right-handed alpha
Helix 100
AL1
U
239 241Right-handed 310
Helix 101
AL2
U
242 254Right-handed alpha
Helix 102
AL3
U
260 281Right-handed alpha
Helix 103
AL4
U
283 285Right-handed 310
Helix 104
AL5
U
286 302Right-handed alpha
Helix 105
AL6
U
302 309Right-handed alpha
Helix 106
AL7
U
310 319Right-handed alpha
Helix 107
AL8
V
4 21Right-handed alpha
Helix 108
AL9
W
172 192Right-handed alpha
Helix 109
AM1
W
202 236Right-handed alpha
Helix 110
AM2
W
239 241Right-handed 310
Helix 111
AM3
W
242 254Right-handed alpha
Helix 112
AM4
W
260 281Right-handed alpha
Helix 113
AM5
W
283 285Right-handed 310
Helix 114
AM6
W
286 309Right-handed alpha
Helix 115
AM7
W
310 319Right-handed alpha
Helix 116
AM8
X
4 24Right-handed alpha
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There are no sheets in PDB entry 5C6H
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