Analysis of interatomic Contacts of Structural Units in PDB entry:
5C6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C6N entry

There is 1 chain in PDB entry 5C6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3LYS 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 5C6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 45Right-handed alpha
Helix 2
AA2
A
50 84Right-handed alpha
Helix 3
AA3
A
89 116Right-handed alpha
Helix 4
AA4
A
118 125Right-handed alpha
Helix 5
AA5
A
129 145Right-handed alpha
Helix 6
AA6
A
146 163Right-handed alpha
Helix 7
AA7
A
165 188Right-handed alpha
Helix 8
AA8
A
194 216Right-handed alpha
Helix 9
AA9
A
217 222Right-handed 310
Helix 10
AB1
A
237 260Right-handed alpha
Helix 11
AB2
A
260 265Right-handed alpha
Helix 12
AB3
A
275 286Right-handed alpha
Helix 13
AB4
A
290 306Right-handed alpha
Helix 14
AB5
A
311 337Right-handed alpha
Helix 15
AB6
A
356 363Right-handed alpha
Helix 16
AB7
A
368 370Right-handed 310
Helix 17
AB8
A
371 381Right-handed alpha
Helix 18
AB9
A
388 399Right-handed alpha
Helix 19
AC1
A
403 408Right-handed alpha
Helix 20
AC2
A
416 421Right-handed alpha
Helix 21
AC3
A
421 438Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5C6N
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il