Analysis of interatomic Contacts of Structural Units in PDB entry:
5C73

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5C73 entry

There are 4 chains in PDB entry 5C73 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	MET 1	LYS 564
K	MET 1	LYS 564
A	MET 1	LYS 564
B	MET 1	ILE 326

There are160 helices in PDB entry 5C73. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	2	9	Right-handed alpha
Helix 2	AA2	C	10	31	Right-handed alpha
Helix 3	AA3	C	37	44	Right-handed alpha
Helix 4	AA4	C	54	61	Right-handed alpha
Helix 5	AA5	C	62	64	Right-handed 310
Helix 6	AA6	C	69	93	Right-handed alpha
Helix 7	AA7	C	96	107	Right-handed alpha
Helix 8	AA8	C	107	115	Right-handed alpha
Helix 9	AA9	C	116	118	Right-handed 310
Helix 10	AB1	C	120	125	Right-handed alpha
Helix 11	AB2	C	128	136	Right-handed alpha
Helix 12	AB3	C	137	148	Right-handed alpha
Helix 13	AB4	C	152	168	Right-handed alpha
Helix 14	AB5	C	172	181	Right-handed alpha
Helix 15	AB6	C	194	220	Right-handed alpha
Helix 16	AB7	C	223	228	Right-handed alpha
Helix 17	AB8	C	230	256	Right-handed alpha
Helix 18	AB9	C	257	278	Right-handed alpha
Helix 19	AC1	C	289	317	Right-handed alpha
Helix 20	AC2	C	321	326	Right-handed alpha
Helix 21	AC3	C	387	395	Right-handed alpha
Helix 22	AC4	C	418	423	Right-handed alpha
Helix 23	AC5	C	453	461	Right-handed alpha
Helix 24	AC6	C	463	468	Right-handed alpha
Helix 25	AC7	C	472	476	Right-handed 310
Helix 26	AC8	C	486	500	Right-handed alpha
Helix 27	AC9	C	518	523	Right-handed alpha
Helix 28	AD1	C	523	528	Right-handed alpha
Helix 29	AD2	K	2	9	Right-handed alpha
Helix 30	AD3	K	10	31	Right-handed alpha
Helix 31	AD4	K	37	44	Right-handed alpha
Helix 32	AD5	K	54	61	Right-handed alpha
Helix 33	AD6	K	62	64	Right-handed 310
Helix 34	AD7	K	69	93	Right-handed alpha
Helix 35	AD8	K	96	106	Right-handed alpha
Helix 36	AD9	K	107	115	Right-handed alpha
Helix 37	AE1	K	116	118	Right-handed 310
Helix 38	AE2	K	120	125	Right-handed alpha
Helix 39	AE3	K	128	136	Right-handed alpha
Helix 40	AE4	K	137	148	Right-handed alpha
Helix 41	AE5	K	152	168	Right-handed alpha
Helix 42	AE6	K	172	181	Right-handed alpha
Helix 43	AE7	K	194	220	Right-handed alpha
Helix 44	AE8	K	230	256	Right-handed alpha
Helix 45	AE9	K	257	277	Right-handed alpha
Helix 46	AF1	K	289	317	Right-handed alpha
Helix 47	AF2	K	321	326	Right-handed alpha
Helix 48	AF3	K	387	395	Right-handed alpha
Helix 49	AF4	K	418	423	Right-handed alpha
Helix 50	AF5	K	453	461	Right-handed alpha
Helix 51	AF6	K	463	468	Right-handed alpha
Helix 52	AF7	K	472	476	Right-handed 310
Helix 53	AF8	K	486	500	Right-handed alpha
Helix 54	AF9	K	518	523	Right-handed alpha
Helix 55	AG1	K	523	528	Right-handed alpha
Helix 56	AG2	A	2	9	Right-handed alpha
Helix 57	AG3	A	10	31	Right-handed alpha
Helix 58	AG4	A	37	44	Right-handed alpha
Helix 59	AG5	A	54	61	Right-handed alpha
Helix 60	AG6	A	62	64	Right-handed 310
Helix 61	AG7	A	69	93	Right-handed alpha
Helix 62	AG8	A	96	106	Right-handed alpha
Helix 63	AG9	A	107	115	Right-handed alpha
Helix 64	AH1	A	116	118	Right-handed 310
Helix 65	AH2	A	120	125	Right-handed alpha
Helix 66	AH3	A	128	136	Right-handed alpha
Helix 67	AH4	A	137	148	Right-handed alpha
Helix 68	AH5	A	152	168	Right-handed alpha
Helix 69	AH6	A	172	181	Right-handed alpha
Helix 70	AH7	A	194	220	Right-handed alpha
Helix 71	AH8	A	230	256	Right-handed alpha
Helix 72	AH9	A	257	278	Right-handed alpha
Helix 73	AI1	A	288	317	Right-handed alpha
Helix 74	AI2	A	387	397	Right-handed alpha
Helix 75	AI3	A	418	423	Right-handed alpha
Helix 76	AI4	A	453	461	Right-handed alpha
Helix 77	AI5	A	463	468	Right-handed alpha
Helix 78	AI6	A	472	476	Right-handed 310
Helix 79	AI7	A	486	500	Right-handed alpha
Helix 80	AI8	A	518	523	Right-handed alpha
Helix 81	AI9	A	523	528	Right-handed alpha
Helix 82	AJ1	B	2	9	Right-handed alpha
Helix 83	AJ2	B	10	31	Right-handed alpha
Helix 84	AJ3	B	37	44	Right-handed alpha
Helix 85	AJ4	B	54	61	Right-handed alpha
Helix 86	AJ5	B	62	64	Right-handed 310
Helix 87	AJ6	B	69	93	Right-handed alpha
Helix 88	AJ7	B	96	106	Right-handed alpha
Helix 89	AJ8	B	107	115	Right-handed alpha
Helix 90	AJ9	B	116	118	Right-handed 310
Helix 91	AK1	B	120	125	Right-handed alpha
Helix 92	AK2	B	128	136	Right-handed alpha
Helix 93	AK3	B	137	148	Right-handed alpha
Helix 94	AK4	B	152	168	Right-handed alpha
Helix 95	AK5	B	172	181	Right-handed alpha
Helix 96	AK6	B	194	220	Right-handed alpha
Helix 97	AK7	B	230	256	Right-handed alpha
Helix 98	AK8	B	257	278	Right-handed alpha
Helix 99	AK9	B	289	317	Right-handed alpha
Helix 100	AL1	B	390	395	Right-handed alpha
Helix 101	AL2	B	418	423	Right-handed alpha
Helix 102	AL3	B	453	461	Right-handed alpha
Helix 103	AL4	B	463	468	Right-handed alpha
Helix 104	AL5	B	472	476	Right-handed 310
Helix 105	AL6	B	486	500	Right-handed alpha
Helix 106	AL7	B	518	523	Right-handed alpha
Helix 107	AL8	B	523	528	Right-handed alpha
Helix 108	AL9	G	2	9	Right-handed alpha
Helix 109	AM1	G	10	31	Right-handed alpha
Helix 110	AM2	G	37	44	Right-handed alpha
Helix 111	AM3	G	54	61	Right-handed alpha
Helix 112	AM4	G	62	64	Right-handed 310
Helix 113	AM5	G	69	93	Right-handed alpha
Helix 114	AM6	G	96	106	Right-handed alpha
Helix 115	AM7	G	107	115	Right-handed alpha
Helix 116	AM8	G	116	118	Right-handed 310
Helix 117	AM9	G	120	125	Right-handed alpha
Helix 118	AN1	G	128	136	Right-handed alpha
Helix 119	AN2	G	137	148	Right-handed alpha
Helix 120	AN3	G	152	168	Right-handed alpha
Helix 121	AN4	G	172	181	Right-handed alpha
Helix 122	AN5	G	194	220	Right-handed alpha
Helix 123	AN6	G	230	256	Right-handed alpha
Helix 124	AN7	G	257	278	Right-handed alpha
Helix 125	AN8	G	289	317	Right-handed alpha
Helix 126	AN9	G	321	326	Right-handed alpha
Helix 127	AO1	G	387	395	Right-handed alpha
Helix 128	AO2	G	418	423	Right-handed alpha
Helix 129	AO3	G	453	461	Right-handed alpha
Helix 130	AO4	G	463	468	Right-handed alpha
Helix 131	AO5	G	472	476	Right-handed 310
Helix 132	AO6	G	488	500	Right-handed alpha
Helix 133	AO7	G	518	523	Right-handed alpha
Helix 134	AO8	G	523	528	Right-handed alpha
Helix 135	AO9	F	2	9	Right-handed alpha
Helix 136	AP1	F	10	31	Right-handed alpha
Helix 137	AP2	F	37	44	Right-handed alpha
Helix 138	AP3	F	54	61	Right-handed alpha
Helix 139	AP4	F	62	64	Right-handed 310
Helix 140	AP5	F	69	93	Right-handed alpha
Helix 141	AP6	F	96	106	Right-handed alpha
Helix 142	AP7	F	107	115	Right-handed alpha
Helix 143	AP8	F	116	118	Right-handed 310
Helix 144	AP9	F	120	125	Right-handed alpha
Helix 145	AQ1	F	128	136	Right-handed alpha
Helix 146	AQ2	F	137	148	Right-handed alpha
Helix 147	AQ3	F	152	168	Right-handed alpha
Helix 148	AQ4	F	172	181	Right-handed alpha
Helix 149	AQ5	F	194	220	Right-handed alpha
Helix 150	AQ6	F	230	256	Right-handed alpha
Helix 151	AQ7	F	257	274	Right-handed alpha
Helix 152	AQ8	F	289	317	Right-handed alpha
Helix 153	AQ9	F	387	395	Right-handed alpha
Helix 154	AR1	F	418	423	Right-handed alpha
Helix 155	AR2	F	453	461	Right-handed alpha
Helix 156	AR3	F	463	468	Right-handed alpha
Helix 157	AR4	F	472	476	Right-handed 310
Helix 158	AR5	F	486	500	Right-handed alpha
Helix 159	AR6	F	518	523	Right-handed alpha
Helix 160	AR7	F	523	528	Right-handed alpha

There are 18 sheets in PDB entry 5C73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	371	373	first strand
Strand 2	C	348	350	anti-parallel
Strand 3	C	407	408	anti-parallel
Strand 4	C	411	412	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	378	379	first strand
Strand 2	C	535	538	parallel
Strand 3	C	505	507	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	553	555	first strand
Strand 2	C	560	562	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	371	373	first strand
Strand 2	K	348	350	anti-parallel
Strand 3	K	407	408	anti-parallel
Strand 4	K	411	412	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	378	379	first strand
Strand 2	K	535	538	parallel
Strand 3	K	505	507	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	553	555	first strand
Strand 2	K	560	562	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	373	first strand
Strand 2	A	348	350	anti-parallel
Strand 3	A	407	408	anti-parallel
Strand 4	A	411	412	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	378	379	first strand
Strand 2	A	535	538	parallel
Strand 3	A	505	507	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	553	555	first strand
Strand 2	A	560	562	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	371	373	first strand
Strand 2	B	348	350	anti-parallel
Strand 3	B	407	408	anti-parallel
Strand 4	B	411	412	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	379	first strand
Strand 2	B	535	538	parallel
Strand 3	B	505	507	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	553	555	first strand
Strand 2	B	560	562	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	371	373	first strand
Strand 2	G	348	350	anti-parallel
Strand 3	G	407	408	anti-parallel
Strand 4	G	411	412	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	378	379	first strand
Strand 2	G	535	538	parallel
Strand 3	G	505	507	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	553	555	first strand
Strand 2	G	560	562	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	371	373	first strand
Strand 2	F	348	350	anti-parallel
Strand 3	F	407	408	anti-parallel
Strand 4	F	411	412	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	378	379	first strand
Strand 2	F	535	538	parallel
Strand 3	F	505	507	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	553	555	first strand
Strand 2	F	560	562	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5C73

Analysis of interatomic Contacts of Structural Units in PDB entry:
5C73