Analysis of interatomic Contacts of Structural Units in PDB entry:
5C9E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C9E entry

There are 2 chains in PDB entry 5C9E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 80VAL 350
B
 THR 80GLU 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5C9E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 95Right-handed alpha
Helix 2
AA2
A
97 103Right-handed alpha
Helix 3
AA3
A
105 109Right-handed 310
Helix 4
AA4
A
125 138Right-handed alpha
Helix 5
AA5
A
143 158Right-handed alpha
Helix 6
AA6
A
162 173Right-handed alpha
Helix 7
AA7
A
177 192Right-handed alpha
Helix 8
AA8
A
201 210Right-handed alpha
Helix 9
AA9
A
214 231Right-handed alpha
Helix 10
AB1
A
235 257Right-handed alpha
Helix 11
AB2
A
261 268Right-handed alpha
Helix 12
AB3
A
272 286Right-handed alpha
Helix 13
AB4
A
290 296Right-handed alpha
Helix 14
AB5
A
296 301Right-handed alpha
Helix 15
AB6
A
307 322Right-handed alpha
Helix 16
AB7
A
323 327Right-handed 310
Helix 17
AB8
A
330 348Right-handed alpha
Helix 18
AB9
B
81 95Right-handed alpha
Helix 19
AC1
B
97 103Right-handed alpha
Helix 20
AC2
B
105 109Right-handed 310
Helix 21
AC3
B
118 122Right-handed 310
Helix 22
AC4
B
127 138Right-handed alpha
Helix 23
AC5
B
143 158Right-handed alpha
Helix 24
AC6
B
162 173Right-handed alpha
Helix 25
AC7
B
177 192Right-handed alpha
Helix 26
AC8
B
201 209Right-handed alpha
Helix 27
AC9
B
215 231Right-handed alpha
Helix 28
AD1
B
235 257Right-handed alpha
Helix 29
AD2
B
261 268Right-handed alpha
Helix 30
AD3
B
272 286Right-handed alpha
Helix 31
AD4
B
290 296Right-handed alpha
Helix 32
AD5
B
296 301Right-handed alpha
Helix 33
AD6
B
304 306Right-handed 310
Helix 34
AD7
B
307 322Right-handed alpha
Helix 35
AD8
B
323 327Right-handed 310
Helix 36
AD9
B
330 348Right-handed alpha
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There are no sheets in PDB entry 5C9E
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