Analysis of interatomic Contacts of Structural Units in PDB entry:
5CC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CC2 entry

There is 1 chain in PDB entry 5CC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3PRO 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5CC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 45Right-handed alpha
Helix 2
AA2
A
68 76Right-handed alpha
Helix 3
AA3
A
91 94Right-handed 310
Helix 4
AA4
A
119 125Right-handed alpha
Helix 5
AA5
A
137 149Right-handed alpha
Helix 6
AA6
A
154 165Right-handed alpha
Helix 7
AA7
A
166 170Right-handed 310
Helix 8
AA8
A
176 187Right-handed alpha
Helix 9
AA9
A
195 205Right-handed alpha
Helix 10
AB1
A
232 246Right-handed alpha
Helix 11
AB2
A
248 257Right-handed alpha
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There are 2 sheets in PDB entry 5CC2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
4 9parallel
Strand 3
A
81 87parallel
Strand 4
A
210 227anti-parallel
Strand 5
A
96 112anti-parallel
Strand 6
A
190 194anti-parallel
Strand 7
A
131 132parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 22first strand
Strand 2
A
25 30anti-parallel
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