Analysis of interatomic Contacts of Structural Units in PDB entry:
5CE5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CE5 entry

There is 1 chain in PDB entry 5CE5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3PRO 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5CE5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 28Right-handed 310
Helix 2
AA2
A
32 36Right-handed 310
Helix 3
AA3
A
37 45Right-handed alpha
Helix 4
AA4
A
59 73Right-handed alpha
Helix 5
AA5
A
79 87Right-handed alpha
Helix 6
AA6
A
99 105Right-handed 310
Helix 7
AA7
A
114 130Right-handed alpha
Helix 8
AA8
A
131 142Right-handed alpha
Helix 9
AA9
A
146 150Right-handed 310
Helix 10
AB1
A
170 179Right-handed alpha
Helix 11
AB2
A
183 197Right-handed alpha
Helix 12
AB3
A
200 205Right-handed alpha
Helix 13
AB4
A
209 213Right-handed 310
Helix 14
AB5
A
221 231Right-handed alpha
Helix 15
AB6
A
232 237Right-handed 310
Helix 16
AB7
A
240 246Right-handed alpha
Helix 17
AB8
A
246 257Right-handed alpha
Helix 18
AB9
A
289 296Right-handed alpha
Helix 19
AC1
A
296 301Right-handed alpha
Helix 20
AC2
A
305 309Right-handed 310
Helix 21
AC3
A
311 315Right-handed 310
Helix 22
AC4
A
322 326Right-handed 310
Helix 23
AC5
A
372 387Right-handed alpha
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There are 3 sheets in PDB entry 5CE5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
11 14parallel
Strand 3
A
108 113parallel
Strand 4
A
156 162parallel
Strand 5
A
264 270parallel
Strand 6
A
349 355parallel
Strand 7
A
337 339parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 77first strand
Strand 2
A
91 95anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 275first strand
Strand 2
A
282 284anti-parallel
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