Analysis of interatomic Contacts of Structural Units in PDB entry:
5CHH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CHH entry

There is 1 chain in PDB entry 5CHH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 5ALA 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5CHH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 23Right-handed alpha
Helix 2
AA2
A
40 52Right-handed alpha
Helix 3
AA3
A
57 64Right-handed alpha
Helix 4
AA4
A
65 66Right-handed 310
Helix 5
AA5
A
67 71Right-handed 310
Helix 6
AA6
A
72 81Right-handed alpha
Helix 7
AA7
A
83 93Right-handed alpha
Helix 8
AA8
A
128 151Right-handed alpha
Helix 9
AA9
A
169 177Right-handed alpha
Helix 10
AB1
A
194 198Right-handed 310
Helix 11
AB2
A
204 215Right-handed alpha
Helix 12
AB3
A
216 227Right-handed alpha
Helix 13
AB4
A
229 241Right-handed alpha
Helix 14
AB5
A
247 255Right-handed alpha
Helix 15
AB6
A
258 269Right-handed alpha
Helix 16
AB7
A
272 289Right-handed alpha
Helix 17
AB8
A
295 303Right-handed alpha
Helix 18
AB9
A
307 320Right-handed alpha
Helix 19
AC1
A
322 329Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5CHH.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 109first strand
Strand 2
A
114 121anti-parallel
Strand 3
A
187 192anti-parallel
Strand 4
A
159 162anti-parallel
Strand 5
A
180 182parallel
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