Analysis of interatomic Contacts of Structural Units in PDB entry:
5CHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CHX entry

There are 30 chains in PDB entry 5CHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ARG 3
A
 ILE 5GLU 25
A
 THR 27GLU 62
A
 GLY 64GLY 64
A
 TYR 66ARG 71
A
 ALA 73SER 89
A
 GLU 91GLU 98
A
 ASN 100LEU 101
A
 ASP 103GLU 114
A
 VAL 116ALA 139
A
 ASN 141VAL 1614
A
 MET 1618GLN 1640
A
 GLN 1642VAL 1643
A
 SER 1645LEU 1650
A
 ASP 1652LEU 1657
B
 SER 0ARG 3
B
 ILE 5GLU 25
B
 THR 27GLU 62
B
 GLY 64GLY 64
B
 TYR 66ARG 71
B
 ALA 73SER 89
B
 GLU 91GLU 98
B
 ASN 100LEU 101
B
 ASP 103GLU 114
B
 VAL 116ALA 139
B
 ASN 141VAL 1614
B
 MET 1618GLN 1640
B
 GLN 1642VAL 1643
B
 SER 1645LEU 1650
B
 ASP 1652LEU 1657
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5CHX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 29Right-handed 310
Helix 2
AA2
A
49 59Right-handed alpha
Helix 3
AA3
A
62 75Right-handed alpha
Helix 4
AA4
A
118 1656Right-handed alpha
Helix 5
AA5
B
27 29Right-handed 310
Helix 6
AA6
B
49 59Right-handed alpha
Helix 7
AA7
B
62 75Right-handed alpha
Helix 8
AA8
B
118 1656Right-handed alpha
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There are 4 sheets in PDB entry 5CHX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 10first strand
Strand 2
A
13 24anti-parallel
Strand 3
A
31 37anti-parallel
Strand 4
A
42 48anti-parallel
Strand 5
A
114 115anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 89first strand
Strand 2
A
94 100anti-parallel
Strand 3
A
105 112anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 10first strand
Strand 2
B
13 24anti-parallel
Strand 3
B
31 37anti-parallel
Strand 4
B
42 48anti-parallel
Strand 5
B
114 115anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 89first strand
Strand 2
B
94 100anti-parallel
Strand 3
B
105 112anti-parallel
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