Analysis of interatomic Contacts of Structural Units in PDB entry:
5CLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CLV entry

There are 16 chains in PDB entry 5CLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2LYS 96
B
 LYS 2GLN 97
C
 C 1 G 20
D
 C 1 G 20
E
 LYS 2ASN 66
F
 LYS 2LYS 65
G
 C 1 G 20
H
 C 1 G 20
I
 ARG 4LYS 65
J
 LYS 3LYS 65
K
 C 1 G 20
L
 C 1 G 20
M
 LYS 2ASP 64
N
 LYS 2LYS 65
O
 C 1 G 20
P
 C 1 G 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 5CLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 14Right-handed alpha
Helix 2
AA2
A
20 32Right-handed alpha
Helix 3
AA3
A
36 45Right-handed alpha
Helix 4
AA4
A
47 65Right-handed alpha
Helix 5
AA5
A
79 94Right-handed alpha
Helix 6
AA6
B
6 14Right-handed alpha
Helix 7
AA7
B
20 32Right-handed alpha
Helix 8
AA8
B
36 45Right-handed alpha
Helix 9
AA9
B
47 64Right-handed alpha
Helix 10
AB1
B
80 97Right-handed alpha
Helix 11
AB2
E
6 14Right-handed alpha
Helix 12
AB3
E
20 32Right-handed alpha
Helix 13
AB4
E
36 45Right-handed alpha
Helix 14
AB5
E
47 65Right-handed alpha
Helix 15
AB6
F
6 14Right-handed alpha
Helix 16
AB7
F
20 32Right-handed alpha
Helix 17
AB8
F
36 45Right-handed alpha
Helix 18
AB9
F
47 64Right-handed alpha
Helix 19
AC1
I
6 15Right-handed alpha
Helix 20
AC2
I
20 32Right-handed alpha
Helix 21
AC3
I
36 44Right-handed alpha
Helix 22
AC4
I
47 63Right-handed alpha
Helix 23
AC5
J
6 14Right-handed alpha
Helix 24
AC6
J
20 32Right-handed alpha
Helix 25
AC7
J
37 45Right-handed alpha
Helix 26
AC8
J
47 64Right-handed alpha
Helix 27
AC9
M
6 14Right-handed alpha
Helix 28
AD1
M
20 32Right-handed alpha
Helix 29
AD2
M
36 45Right-handed alpha
Helix 30
AD3
M
47 64Right-handed alpha
Helix 31
AD4
N
6 14Right-handed alpha
Helix 32
AD5
N
20 32Right-handed alpha
Helix 33
AD6
N
36 44Right-handed alpha
Helix 34
AD7
N
47 64Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5CLV.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 78first strand
Strand 2
B
72 79anti-parallel
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