Analysis of interatomic Contacts of Structural Units in PDB entry:
5CO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CO4 entry

There are 2 chains in PDB entry 5CO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 HIS -12GLY 148
A
 GLY -2ARG 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5CO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
-10 -4Right-handed alpha
Helix 2
AA2
B
11 26Right-handed alpha
Helix 3
AA3
B
41 45Right-handed 310
Helix 4
AA4
B
51 55Right-handed 310
Helix 5
AA5
B
62 70Right-handed alpha
Helix 6
AA6
B
88 90Right-handed 310
Helix 7
AA7
B
108 115Right-handed alpha
Helix 8
AA8
B
130 148Right-handed alpha
Helix 9
AA9
A
11 26Right-handed alpha
Helix 10
AB1
A
41 48Right-handed alpha
Helix 11
AB2
A
51 55Right-handed 310
Helix 12
AB3
A
62 69Right-handed alpha
Helix 13
AB4
A
88 90Right-handed 310
Helix 14
AB5
A
108 115Right-handed alpha
Helix 15
AB6
A
130 147Right-handed alpha
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There are 2 sheets in PDB entry 5CO4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
29 32parallel
Strand 3
B
3 7parallel
Strand 4
B
97 100parallel
Strand 5
B
76 79parallel
Strand 6
B
117 119parallel
Strand 7
B
85 86parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
29 32parallel
Strand 3
A
3 7parallel
Strand 4
A
97 100parallel
Strand 5
A
76 79parallel
Strand 6
A
117 119parallel
Strand 7
A
85 86parallel
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