Analysis of interatomic Contacts of Structural Units in PDB entry:
5COM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5COM entry

There are 2 chains in PDB entry 5COM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 13LEU 183
B
 ARG 13LEU 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5COM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 35Right-handed alpha
Helix 2
AA2
A
40 44Right-handed 310
Helix 3
AA3
A
54 78Right-handed alpha
Helix 4
AA4
A
93 106Right-handed alpha
Helix 5
AA5
A
109 131Right-handed alpha
Helix 6
AA6
A
132 138Right-handed alpha
Helix 7
AA7
A
142 149Right-handed alpha
Helix 8
AA8
A
155 164Right-handed alpha
Helix 9
AA9
A
164 183Right-handed alpha
Helix 10
AB1
B
17 35Right-handed alpha
Helix 11
AB2
B
40 44Right-handed 310
Helix 12
AB3
B
54 78Right-handed alpha
Helix 13
AB4
B
93 106Right-handed alpha
Helix 14
AB5
B
109 131Right-handed alpha
Helix 15
AB6
B
132 138Right-handed alpha
Helix 16
AB7
B
142 148Right-handed alpha
Helix 17
AB8
B
155 163Right-handed alpha
Helix 18
AB9
B
164 183Right-handed alpha
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There are no sheets in PDB entry 5COM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il