Analysis of interatomic Contacts of Structural Units in PDB entry:
5CQS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CQS entry

There are 4 chains in PDB entry 5CQS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 919PHE 1349
B
 ASP 920PHE 1349
C
 GLN 919PHE 1349
D
 GLN 919PHE 1349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 5CQS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
922 931Right-handed alpha
Helix 2
AA2
A
933 944Right-handed alpha
Helix 3
AA3
A
947 950Right-handed 310
Helix 4
AA4
A
951 960Right-handed alpha
Helix 5
AA5
A
962 975Right-handed alpha
Helix 6
AA6
A
976 985Right-handed alpha
Helix 7
AA7
A
994 1005Right-handed alpha
Helix 8
AA8
A
1006 1014Right-handed alpha
Helix 9
AA9
A
1017 1033Right-handed alpha
Helix 10
AB1
A
1037 1048Right-handed alpha
Helix 11
AB2
A
1050 1061Right-handed alpha
Helix 12
AB3
A
1063 1074Right-handed alpha
Helix 13
AB4
A
1078 1093Right-handed alpha
Helix 14
AB5
A
1095 1108Right-handed alpha
Helix 15
AB6
A
1109 1120Right-handed alpha
Helix 16
AB7
A
1122 1133Right-handed alpha
Helix 17
AB8
A
1137 1142Right-handed alpha
Helix 18
AB9
A
1142 1171Right-handed alpha
Helix 19
AC1
A
1253 1283Right-handed alpha
Helix 20
AC2
A
1285 1309Right-handed alpha
Helix 21
AC3
A
1344 1348Right-handed 310
Helix 22
AC4
B
922 931Right-handed alpha
Helix 23
AC5
B
933 943Right-handed alpha
Helix 24
AC6
B
947 961Right-handed alpha
Helix 25
AC7
B
962 975Right-handed alpha
Helix 26
AC8
B
976 988Right-handed alpha
Helix 27
AC9
B
994 1005Right-handed alpha
Helix 28
AD1
B
1006 1014Right-handed alpha
Helix 29
AD2
B
1017 1035Right-handed alpha
Helix 30
AD3
B
1037 1048Right-handed alpha
Helix 31
AD4
B
1050 1061Right-handed alpha
Helix 32
AD5
B
1063 1075Right-handed alpha
Helix 33
AD6
B
1078 1093Right-handed alpha
Helix 34
AD7
B
1095 1108Right-handed alpha
Helix 35
AD8
B
1109 1120Right-handed alpha
Helix 36
AD9
B
1122 1133Right-handed alpha
Helix 37
AE1
B
1137 1142Right-handed alpha
Helix 38
AE2
B
1142 1172Right-handed alpha
Helix 39
AE3
B
1254 1283Right-handed alpha
Helix 40
AE4
B
1285 1307Right-handed alpha
Helix 41
AE5
B
1344 1348Right-handed 310
Helix 42
AE6
C
922 931Right-handed alpha
Helix 43
AE7
C
933 944Right-handed alpha
Helix 44
AE8
C
947 950Right-handed 310
Helix 45
AE9
C
951 961Right-handed alpha
Helix 46
AF1
C
962 975Right-handed alpha
Helix 47
AF2
C
976 986Right-handed alpha
Helix 48
AF3
C
994 1004Right-handed alpha
Helix 49
AF4
C
1006 1014Right-handed alpha
Helix 50
AF5
C
1017 1035Right-handed alpha
Helix 51
AF6
C
1037 1048Right-handed alpha
Helix 52
AF7
C
1050 1062Right-handed alpha
Helix 53
AF8
C
1063 1075Right-handed alpha
Helix 54
AF9
C
1078 1093Right-handed alpha
Helix 55
AG1
C
1095 1106Right-handed alpha
Helix 56
AG2
C
1109 1120Right-handed alpha
Helix 57
AG3
C
1122 1133Right-handed alpha
Helix 58
AG4
C
1137 1142Right-handed alpha
Helix 59
AG5
C
1142 1164Right-handed alpha
Helix 60
AG6
C
1261 1282Right-handed alpha
Helix 61
AG7
C
1285 1305Right-handed alpha
Helix 62
AG8
C
1344 1348Right-handed 310
Helix 63
AG9
D
922 930Right-handed alpha
Helix 64
AH1
D
933 943Right-handed alpha
Helix 65
AH2
D
947 950Right-handed 310
Helix 66
AH3
D
951 960Right-handed alpha
Helix 67
AH4
D
962 974Right-handed alpha
Helix 68
AH5
D
976 987Right-handed alpha
Helix 69
AH6
D
994 1004Right-handed alpha
Helix 70
AH7
D
1006 1014Right-handed alpha
Helix 71
AH8
D
1017 1035Right-handed alpha
Helix 72
AH9
D
1037 1048Right-handed alpha
Helix 73
AI1
D
1050 1061Right-handed alpha
Helix 74
AI2
D
1063 1075Right-handed alpha
Helix 75
AI3
D
1078 1093Right-handed alpha
Helix 76
AI4
D
1095 1106Right-handed alpha
Helix 77
AI5
D
1109 1120Right-handed alpha
Helix 78
AI6
D
1122 1133Right-handed alpha
Helix 79
AI7
D
1137 1142Right-handed alpha
Helix 80
AI8
D
1142 1170Right-handed alpha
Helix 81
AI9
D
1254 1282Right-handed alpha
Helix 82
AJ1
D
1285 1303Right-handed alpha
Helix 83
AJ2
D
1344 1348Right-handed 310
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There are no sheets in PDB entry 5CQS
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