Analysis of interatomic Contacts of Structural Units in PDB entry:
5CR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CR8 entry

There are 2 chains in PDB entry 5CR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ARG 359ASP 471
A
 ARG 359ASP 471
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5CR8

There are 4 sheets in PDB entry 5CR8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
408 414first strand
Strand 2
D
361 367anti-parallel
Strand 3
D
450 457parallel
Strand 4
D
462 469anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
390 396first strand
Strand 2
D
373 384anti-parallel
Strand 3
D
418 430anti-parallel
Strand 4
D
434 445anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 414first strand
Strand 2
A
361 367anti-parallel
Strand 3
A
450 457parallel
Strand 4
A
462 469anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 396first strand
Strand 2
A
373 385anti-parallel
Strand 3
A
418 429anti-parallel
Strand 4
A
435 445anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il