Analysis of interatomic Contacts of Structural Units in PDB entry:
5CRX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CRX entry

There are 4 chains in PDB entry 5CRX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
A 2 A 34
D
A 2 A 34
A
THR 19GLU 340
B
THR 19GLY 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5CRX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
21 32Right-handed alpha
Helix 2
2
A
34 36Right-handed 310
Helix 3
18
A
39 58Right-handed alpha
Helix 4
4
A
68 81Right-handed alpha
Helix 5
5
A
85 100Right-handed alpha
Helix 6
21
A
107 109Right-handed 310
Helix 7
7
A
111 125Right-handed alpha
Helix 8
23
A
139 149Right-handed alpha
Helix 9
24
A
155 170Right-handed alpha
Helix 10
10
A
174 179Right-handed alpha
Helix 11
11
A
216 228Right-handed alpha
Helix 12
29
A
258 273Right-handed alpha
Helix 13
13
A
290 301Right-handed alpha
Helix 14
14
A
306 311Right-handed alpha
Helix 15
15
A
326 328Right-handed 310
Helix 16
16
A
334 339Right-handed alpha
Helix 17
17
B
20 36Right-handed alpha
Helix 18
18
B
39 58Right-handed alpha
Helix 19
19
B
68 80Right-handed alpha
Helix 20
20
B
85 102Right-handed alpha
Helix 21
21
B
107 109Right-handed 310
Helix 22
22
B
111 126Right-handed alpha
Helix 23
23
B
139 149Right-handed alpha
Helix 24
24
B
155 170Right-handed alpha
Helix 25
25
B
174 177Right-handed alpha
Helix 26
26
B
182 184Right-handed 310
Helix 27
27
B
215 228Right-handed alpha
Helix 28
28
B
230 232Right-handed 310
Helix 29
29
B
258 273Right-handed alpha
Helix 30
30
B
290 300Right-handed alpha
Helix 31
31
B
306 313Right-handed alpha
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There is 1 sheet ( B) in PDB entry 5CRX.

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
185 187first strand
Strand 2
B
193 197anti-parallel
Strand 3
B
209 212anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il