Analysis of interatomic Contacts of Structural Units in PDB entry:
5CSC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CSC entry

There are 2 chains in PDB entry 5CSC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 433
B
 ALA 1LEU 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5CSC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA
A
5 29Right-handed alpha
Helix 2
AB
A
37 43Right-handed alpha
Helix 3
AC
A
70 78Right-handed alpha
Helix 4
AD
A
88 99Right-handed alpha
Helix 5
AE
A
103 118Right-handed alpha
Helix 6
AF
A
121 131Right-handed alpha
Helix 7
AG
A
136 152Right-handed alpha
Helix 8
AH
A
153 161Right-handed alpha
Helix 9
AI
A
163 195Right-handed alpha
Helix 10
AJ
A
208 218Right-handed alpha
Helix 11
AK
A
221 236Right-handed alpha
Helix 12
AL
A
242 255Right-handed alpha
Helix 13
AM
A
257 271Right-handed alpha
Helix 14
AN
A
274 291Right-handed alpha
Helix 15
AO
A
297 312Right-handed alpha
Helix 16
AP
A
327 341Right-handed alpha
Helix 17
AQ
A
344 365Right-handed alpha
Helix 18
AR
A
373 386Right-handed alpha
Helix 19
AS
A
390 416Right-handed alpha
Helix 20
AT
A
426 433Right-handed alpha
Helix 21
BA
B
5 29Right-handed alpha
Helix 22
BB
B
37 43Right-handed alpha
Helix 23
BC
B
70 78Right-handed alpha
Helix 24
BD
B
88 99Right-handed alpha
Helix 25
BE
B
103 118Right-handed alpha
Helix 26
BF
B
121 131Right-handed alpha
Helix 27
BG
B
136 152Right-handed alpha
Helix 28
BH
B
153 161Right-handed alpha
Helix 29
BI
B
163 195Right-handed alpha
Helix 30
BJ
B
208 218Right-handed alpha
Helix 31
BK
B
221 236Right-handed alpha
Helix 32
BL
B
242 255Right-handed alpha
Helix 33
BM
B
257 271Right-handed alpha
Helix 34
BN
B
274 291Right-handed alpha
Helix 35
BO
B
297 312Right-handed alpha
Helix 36
BP
B
327 341Right-handed alpha
Helix 37
BQ
B
344 365Right-handed alpha
Helix 38
BR
B
373 386Right-handed alpha
Helix 39
BS
B
390 416Right-handed alpha
Helix 40
BT
B
426 433Right-handed alpha
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There are 2 sheets in PDB entry 5CSC. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
62 65anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
62 65anti-parallel
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