Analysis of interatomic Contacts of Structural Units in PDB entry:
5CSZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CSZ entry

There are 6 chains in PDB entry 5CSZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 VAL 2SER 228
L
 ASP 1GLY 213
A
 VAL 2LYS 227
B
 ASP 1GLU 214
D
 ASP 1GLU 11
E
 ASP 1TYR 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5CSZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
28 32Right-handed 310
Helix 2
AA2
H
74 76Right-handed 310
Helix 3
AA3
H
87 91Right-handed 310
Helix 4
AA4
H
169 171Right-handed 310
Helix 5
AA5
H
198 202Right-handed 310
Helix 6
AA6
H
214 217Right-handed 310
Helix 7
AA7
L
30 32Right-handed 310
Helix 8
AA8
L
80 84Right-handed 310
Helix 9
AA9
L
122 127Right-handed alpha
Helix 10
AB1
L
184 190Right-handed alpha
Helix 11
AB2
A
28 32Right-handed 310
Helix 12
AB3
A
74 76Right-handed 310
Helix 13
AB4
A
87 91Right-handed 310
Helix 14
AB5
A
169 171Right-handed 310
Helix 15
AB6
A
198 202Right-handed 310
Helix 16
AB7
A
214 217Right-handed 310
Helix 17
AB8
B
30 32Right-handed 310
Helix 18
AB9
B
80 84Right-handed 310
Helix 19
AC1
B
122 127Right-handed alpha
Helix 20
AC2
B
184 190Right-handed alpha
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There are 22 sheets in PDB entry 5CSZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
120 124parallel
Strand 3
H
92 100anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
120 124parallel
Strand 3
H
92 100anti-parallel
Strand 4
H
112 116anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
133 137first strand
Strand 2
H
149 158anti-parallel
Strand 3
H
189 197anti-parallel
Strand 4
H
176 178anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
133 137first strand
Strand 2
H
149 158anti-parallel
Strand 3
H
189 197anti-parallel
Strand 4
H
182 183anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
164 167first strand
Strand 2
H
208 213anti-parallel
Strand 3
H
218 223anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
71 76anti-parallel
Strand 4
L
63 68anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
103 107parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
46 50anti-parallel
Strand 6
L
54 55anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
103 107parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
98 99anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
115 119first strand
Strand 2
L
130 140anti-parallel
Strand 3
L
174 183anti-parallel
Strand 4
L
160 164anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
154 155first strand
Strand 2
L
146 151anti-parallel
Strand 3
L
192 198anti-parallel
Strand 4
L
206 211anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
68 73anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
120 124parallel
Strand 3
A
92 100anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 51anti-parallel
Strand 6
A
58 60anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
120 124parallel
Strand 3
A
92 100anti-parallel
Strand 4
A
112 116anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 137first strand
Strand 2
A
149 158anti-parallel
Strand 3
A
189 197anti-parallel
Strand 4
A
176 178anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 137first strand
Strand 2
A
149 158anti-parallel
Strand 3
A
189 197anti-parallel
Strand 4
A
182 183anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 167first strand
Strand 2
A
208 213anti-parallel
Strand 3
A
218 223anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
71 76anti-parallel
Strand 4
B
63 68anti-parallel
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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
103 107parallel
Strand 3
B
86 91anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
46 50anti-parallel
Strand 6
B
54 55anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
103 107parallel
Strand 3
B
86 91anti-parallel
Strand 4
B
98 99anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 119first strand
Strand 2
B
130 140anti-parallel
Strand 3
B
174 183anti-parallel
Strand 4
B
160 164anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 155first strand
Strand 2
B
146 151anti-parallel
Strand 3
B
192 198anti-parallel
Strand 4
B
206 211anti-parallel
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