Analysis of interatomic Contacts of Structural Units in PDB entry:
5CUW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CUW entry

There is 1 chain in PDB entry 5CUW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 168VAL 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5CUW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
203 206Right-handed 310
Helix 2
AA2
A
220 224Right-handed 310
Helix 3
AA3
A
261 265Right-handed 310
Helix 4
AA4
A
295 300Right-handed 310
Helix 5
AA5
A
343 345Right-handed 310
Helix 6
AA6
A
347 351Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5CUW.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 202first strand
Strand 2
A
207 213anti-parallel
Strand 3
A
226 228parallel
Strand 4
A
244 249anti-parallel
Strand 5
A
313 321parallel
Strand 6
A
328 341anti-parallel
Strand 7
A
278 291anti-parallel
Strand 8
A
270 274anti-parallel
Strand 9
A
196 202anti-parallel
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