Analysis of interatomic Contacts of Structural Units in PDB entry:
5CWA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CWA entry

There is 1 chain in PDB entry 5CWA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3ALA 511
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5CWA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 21Right-handed alpha
Helix 2
AA2
A
36 45Right-handed alpha
Helix 3
AA3
A
57 61Right-handed 310
Helix 4
AA4
A
99 111Right-handed alpha
Helix 5
AA5
A
135 141Right-handed 310
Helix 6
AA6
A
190 211Right-handed alpha
Helix 7
AA7
A
232 249Right-handed alpha
Helix 8
AA8
A
268 280Right-handed alpha
Helix 9
AA9
A
332 345Right-handed alpha
Helix 10
AB1
A
345 365Right-handed alpha
Helix 11
AB2
A
402 411Right-handed alpha
Helix 12
AB3
A
413 416Right-handed 310
Helix 13
AB4
A
420 432Right-handed alpha
Helix 14
AB5
A
481 504Right-handed alpha
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There are 4 sheets in PDB entry 5CWA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 31first strand
Strand 2
A
174 182anti-parallel
Strand 3
A
164 169anti-parallel
Strand 4
A
66 71anti-parallel
Strand 5
A
51 55anti-parallel
Strand 6
A
284 291anti-parallel
Strand 7
A
297 305anti-parallel
Strand 8
A
460 464anti-parallel
Strand 9
A
467 473anti-parallel
Strand 10
A
258 264anti-parallel
Strand 11
A
228 229anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
76 80anti-parallel
Strand 3
A
157 162anti-parallel
Strand 4
A
128 133anti-parallel
Strand 5
A
442 447anti-parallel
Strand 6
A
452 456anti-parallel
Strand 7
A
308 313anti-parallel
Strand 8
A
316 319anti-parallel
Strand 9
A
386 396anti-parallel
Strand 10
A
322 327anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
76 80anti-parallel
Strand 3
A
157 162anti-parallel
Strand 4
A
128 133anti-parallel
Strand 5
A
442 447anti-parallel
Strand 6
A
452 456anti-parallel
Strand 7
A
308 313anti-parallel
Strand 8
A
316 319anti-parallel
Strand 9
A
386 396anti-parallel
Strand 10
A
373 382anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 255first strand
Strand 2
A
418 419anti-parallel
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