Analysis of interatomic Contacts of Structural Units in PDB entry:
5CWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CWZ entry

There are 3 chains in PDB entry 5CWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 11ASP 307
B
 ASP 11ASP 307
C
 LEU 15ARG 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5CWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
62 77Right-handed alpha
Helix 3
AA3
A
112 120Right-handed alpha
Helix 4
AA4
A
126 147Right-handed alpha
Helix 5
AA5
A
211 229Right-handed alpha
Helix 6
AA6
A
237 248Right-handed alpha
Helix 7
AA7
A
259 270Right-handed alpha
Helix 8
AA8
A
273 277Right-handed 310
Helix 9
AA9
A
279 285Right-handed alpha
Helix 10
AB1
A
286 291Right-handed alpha
Helix 11
AB2
A
294 306Right-handed alpha
Helix 12
AB3
B
59 61Right-handed 310
Helix 13
AB4
B
62 77Right-handed alpha
Helix 14
AB5
B
113 119Right-handed alpha
Helix 15
AB6
B
126 147Right-handed alpha
Helix 16
AB7
B
211 229Right-handed alpha
Helix 17
AB8
B
237 245Right-handed alpha
Helix 18
AB9
B
259 270Right-handed alpha
Helix 19
AC1
B
273 277Right-handed 310
Helix 20
AC2
B
279 285Right-handed alpha
Helix 21
AC3
B
286 291Right-handed alpha
Helix 22
AC4
B
294 305Right-handed alpha
Helix 23
AC5
C
67 77Right-handed alpha
Helix 24
AC6
C
113 119Right-handed alpha
Helix 25
AC7
C
126 147Right-handed alpha
Helix 26
AC8
C
211 229Right-handed alpha
Helix 27
AC9
C
237 245Right-handed alpha
Helix 28
AD1
C
259 270Right-handed alpha
Helix 29
AD2
C
279 285Right-handed alpha
Helix 30
AD3
C
286 291Right-handed alpha
Helix 31
AD4
C
297 306Right-handed alpha
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There are 6 sheets in PDB entry 5CWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 32first strand
Strand 2
A
38 44anti-parallel
Strand 3
A
50 58anti-parallel
Strand 4
A
99 105anti-parallel
Strand 5
A
85 91anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 161first strand
Strand 2
A
167 169anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 32first strand
Strand 2
B
38 44anti-parallel
Strand 3
B
50 58anti-parallel
Strand 4
B
99 105anti-parallel
Strand 5
B
85 91anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
159 161anti-parallel
Strand 3
B
167 169anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 32first strand
Strand 2
C
38 44anti-parallel
Strand 3
C
50 56anti-parallel
Strand 4
C
100 105anti-parallel
Strand 5
C
85 91anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 112first strand
Strand 2
C
159 161anti-parallel
Strand 3
C
167 169anti-parallel
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