Analysis of interatomic Contacts of Structural Units in PDB entry:
5CX8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5CX8 entry

There are 2 chains in PDB entry 5CX8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 30	ILE 501
B	ASP 30	ILE 501

There are 44 helices in PDB entry 5CX8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	37	54	Right-handed alpha
Helix 2	AA2	A	57	60	Right-handed 310
Helix 3	AA3	A	61	67	Right-handed alpha
Helix 4	AA4	A	81	86	Right-handed alpha
Helix 5	AA5	A	88	93	Right-handed alpha
Helix 6	AA6	A	105	133	Right-handed alpha
Helix 7	AA7	A	138	168	Right-handed alpha
Helix 8	AA8	A	201	218	Right-handed alpha
Helix 9	AA9	A	231	247	Right-handed alpha
Helix 10	AB1	A	248	258	Right-handed alpha
Helix 11	AB2	A	270	279	Right-handed alpha
Helix 12	AB3	A	324	330	Right-handed alpha
Helix 13	AB4	A	335	340	Right-handed 310
Helix 14	AB5	A	360	364	Right-handed 310
Helix 15	AB6	A	381	395	Right-handed alpha
Helix 16	AB7	A	397	412	Right-handed alpha
Helix 17	AB8	A	420	433	Right-handed alpha
Helix 18	AB9	A	437	445	Right-handed alpha
Helix 19	AC1	A	450	454	Right-handed 310
Helix 20	AC2	A	457	461	Right-handed 310
Helix 21	AC3	A	477	481	Right-handed 310
Helix 22	AC4	A	485	492	Right-handed alpha
Helix 23	AC5	B	37	54	Right-handed alpha
Helix 24	AC6	B	57	60	Right-handed 310
Helix 25	AC7	B	61	67	Right-handed alpha
Helix 26	AC8	B	81	86	Right-handed alpha
Helix 27	AC9	B	88	93	Right-handed alpha
Helix 28	AD1	B	105	133	Right-handed alpha
Helix 29	AD2	B	138	168	Right-handed alpha
Helix 30	AD3	B	201	218	Right-handed alpha
Helix 31	AD4	B	231	247	Right-handed alpha
Helix 32	AD5	B	248	258	Right-handed alpha
Helix 33	AD6	B	270	279	Right-handed alpha
Helix 34	AD7	B	324	329	Right-handed alpha
Helix 35	AD8	B	335	339	Right-handed 310
Helix 36	AD9	B	360	364	Right-handed 310
Helix 37	AE1	B	381	395	Right-handed alpha
Helix 38	AE2	B	397	412	Right-handed alpha
Helix 39	AE3	B	420	433	Right-handed alpha
Helix 40	AE4	B	437	445	Right-handed alpha
Helix 41	AE5	B	450	454	Right-handed 310
Helix 42	AE6	B	457	461	Right-handed 310
Helix 43	AE7	B	477	481	Right-handed 310
Helix 44	AE8	B	485	492	Right-handed alpha

There are 12 sheets in PDB entry 5CX8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	73	first strand
Strand 2	A	321	323	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	98	first strand
Strand 2	A	103	104	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	287	290	first strand
Strand 2	A	377	380	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	301	first strand
Strand 2	A	373	374	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	311	first strand
Strand 2	A	314	317	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	346	first strand
Strand 2	A	351	354	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	73	first strand
Strand 2	B	321	323	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	B	103	104	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	287	290	first strand
Strand 2	B	377	380	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	300	301	first strand
Strand 2	B	373	374	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	311	first strand
Strand 2	B	314	317	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	346	first strand
Strand 2	B	351	354	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5CX8

Analysis of interatomic Contacts of Structural Units in PDB entry:
5CX8