Analysis of interatomic Contacts of Structural Units in PDB entry:
5CXV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CXV entry

There are 2 chains in PDB entry 5CXV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 20LYS 439
C
 ASP 1ASP 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5CXV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 53Right-handed alpha
Helix 2
AA2
A
54 57Right-handed 310
Helix 3
AA3
A
58 77Right-handed alpha
Helix 4
AA4
A
77 89Right-handed alpha
Helix 5
AA5
A
94 129Right-handed alpha
Helix 6
AA6
A
133 137Right-handed 310
Helix 7
AA7
A
138 169Right-handed alpha
Helix 8
AA8
A
185 197Right-handed alpha
Helix 9
AA9
A
197 213Right-handed alpha
Helix 10
AB1
A
214 1011Right-handed alpha
Helix 11
AB2
A
1037 1050Right-handed alpha
Helix 12
AB3
A
1058 1080Right-handed alpha
Helix 13
AB4
A
1082 1090Right-handed alpha
Helix 14
AB5
A
1091 1112Right-handed alpha
Helix 15
AB6
A
1113 1122Right-handed alpha
Helix 16
AB7
A
1124 1133Right-handed alpha
Helix 17
AB8
A
1135 1141Right-handed alpha
Helix 18
AB9
A
1141 1155Right-handed alpha
Helix 19
AC1
A
357 391Right-handed alpha
Helix 20
AC2
A
396 407Right-handed alpha
Helix 21
AC3
A
408 422Right-handed alpha
Helix 22
AC4
A
424 434Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5CXV.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1013 1018first strand
Strand 2
A
1024 1027anti-parallel
Strand 3
A
1030 1033anti-parallel
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