Analysis of interatomic Contacts of Structural Units in PDB entry:
5CZC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CZC entry

There are 2 chains in PDB entry 5CZC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 19LEU 318
B
 GLY 19GLN 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5CZC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 43Right-handed alpha
Helix 2
AA2
A
43 58Right-handed alpha
Helix 3
AA3
A
60 68Right-handed alpha
Helix 4
AA4
A
73 96Right-handed alpha
Helix 5
AA5
A
107 116Right-handed alpha
Helix 6
AA6
A
120 142Right-handed alpha
Helix 7
AA7
A
155 169Right-handed alpha
Helix 8
AA8
A
192 203Right-handed alpha
Helix 9
AA9
A
217 219Right-handed 310
Helix 10
AB1
A
220 231Right-handed alpha
Helix 11
AB2
A
255 266Right-handed alpha
Helix 12
AB3
A
273 283Right-handed alpha
Helix 13
AB4
A
300 305Right-handed alpha
Helix 14
AB5
A
313 318Right-handed alpha
Helix 15
AB6
B
32 43Right-handed alpha
Helix 16
AB7
B
43 58Right-handed alpha
Helix 17
AB8
B
60 68Right-handed alpha
Helix 18
AB9
B
73 95Right-handed alpha
Helix 19
AC1
B
107 116Right-handed alpha
Helix 20
AC2
B
120 142Right-handed alpha
Helix 21
AC3
B
155 169Right-handed alpha
Helix 22
AC4
B
192 203Right-handed alpha
Helix 23
AC5
B
217 219Right-handed 310
Helix 24
AC6
B
220 231Right-handed alpha
Helix 25
AC7
B
255 267Right-handed alpha
Helix 26
AC8
B
273 283Right-handed alpha
Helix 27
AC9
B
300 307Right-handed alpha
Helix 28
AD1
B
313 319Right-handed alpha
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There are 4 sheets in PDB entry 5CZC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 253first strand
Strand 2
A
244 245anti-parallel
Strand 3
A
101 104parallel
Strand 4
A
20 25parallel
Strand 5
A
285 291parallel
Strand 6
A
308 312parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 211first strand
Strand 2
A
146 152anti-parallel
Strand 3
A
183 189anti-parallel
Strand 4
A
173 180anti-parallel
Strand 5
A
271 272parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 253first strand
Strand 2
B
244 245anti-parallel
Strand 3
B
101 104parallel
Strand 4
B
20 25parallel
Strand 5
B
285 291parallel
Strand 6
B
308 312parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 211first strand
Strand 2
B
146 152anti-parallel
Strand 3
B
183 189anti-parallel
Strand 4
B
173 180anti-parallel
Strand 5
B
271 272parallel
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