Analysis of interatomic Contacts of Structural Units in PDB entry:
5CZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CZJ entry

There are 2 chains in PDB entry 5CZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 23ALA 340
B
 LYS 22ALA 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5CZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 59Right-handed alpha
Helix 2
AA2
A
71 75Right-handed 310
Helix 3
AA3
A
76 90Right-handed alpha
Helix 4
AA4
A
102 117Right-handed alpha
Helix 5
AA5
A
133 147Right-handed alpha
Helix 6
AA6
A
158 162Right-handed 310
Helix 7
AA7
A
166 177Right-handed alpha
Helix 8
AA8
A
188 199Right-handed alpha
Helix 9
AA9
A
212 214Right-handed 310
Helix 10
AB1
A
215 223Right-handed alpha
Helix 11
AB2
A
231 235Right-handed 310
Helix 12
AB3
A
236 251Right-handed alpha
Helix 13
AB4
A
254 273Right-handed alpha
Helix 14
AB5
A
274 276Right-handed 310
Helix 15
AB6
A
279 292Right-handed alpha
Helix 16
AB7
A
293 297Right-handed 310
Helix 17
AB8
A
307 329Right-handed alpha
Helix 18
AB9
A
333 338Right-handed alpha
Helix 19
AC1
B
23 27Right-handed 310
Helix 20
AC2
B
44 59Right-handed alpha
Helix 21
AC3
B
67 75Right-handed 310
Helix 22
AC4
B
76 90Right-handed alpha
Helix 23
AC5
B
102 117Right-handed alpha
Helix 24
AC6
B
133 148Right-handed alpha
Helix 25
AC7
B
166 177Right-handed alpha
Helix 26
AC8
B
188 199Right-handed alpha
Helix 27
AC9
B
215 223Right-handed alpha
Helix 28
AD1
B
231 235Right-handed 310
Helix 29
AD2
B
236 251Right-handed alpha
Helix 30
AD3
B
254 268Right-handed alpha
Helix 31
AD4
B
268 274Right-handed alpha
Helix 32
AD5
B
275 277Right-handed 310
Helix 33
AD6
B
279 292Right-handed alpha
Helix 34
AD7
B
293 297Right-handed 310
Helix 35
AD8
B
307 329Right-handed alpha
Helix 36
AD9
B
333 338Right-handed alpha
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There are 2 sheets in PDB entry 5CZJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
227 230parallel
Strand 3
A
207 210parallel
Strand 4
A
180 185parallel
Strand 5
A
153 157parallel
Strand 6
A
120 123parallel
Strand 7
A
94 97parallel
Strand 8
A
63 65parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
227 230parallel
Strand 3
B
207 210parallel
Strand 4
B
180 185parallel
Strand 5
B
153 157parallel
Strand 6
B
120 123parallel
Strand 7
B
94 97parallel
Strand 8
B
63 64parallel
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