Analysis of interatomic Contacts of Structural Units in PDB entry:
5CZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CZO entry

There are 24 chains in PDB entry 5CZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ARG 7
A
 PHE 9SER 153
A
 TYR 156GLU 230
A
 LYS 232CYS 255
A
 ASN 257GLU 262
A
 PRO 264ILE 336
A
 LEU 338TYR 351
A
 ASN 353ILE 364
A
 GLN 366GLY 389
C
 CYS 91ASN 154
C
 TYR 156TRP 165
C
 MET 167ASN 191
B
 ALA 0ARG 7
B
 PHE 9SER 153
B
 TYR 156GLU 230
B
 LYS 232CYS 255
B
 ASN 257GLU 262
B
 PRO 264ILE 336
B
 LEU 338TYR 351
B
 ASN 353ILE 364
B
 GLN 366ASP 387
D
 CYS 91ASN 154
D
 TYR 156TRP 165
D
 MET 167ASN 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 5CZO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 59Right-handed alpha
Helix 2
AA2
A
89 96Right-handed alpha
Helix 3
AA3
A
101 121Right-handed alpha
Helix 4
AA4
A
130 132Right-handed 310
Helix 5
AA5
A
139 142Right-handed 310
Helix 6
AA6
A
181 186Right-handed alpha
Helix 7
AA7
A
191 209Right-handed alpha
Helix 8
AA8
A
220 235Right-handed alpha
Helix 9
AA9
A
236 241Right-handed alpha
Helix 10
AB1
A
245 257Right-handed alpha
Helix 11
AB2
A
265 280Right-handed alpha
Helix 12
AB3
A
288 310Right-handed alpha
Helix 13
AB4
A
327 344Right-handed alpha
Helix 14
AB5
A
360 373Right-handed alpha
Helix 15
AB6
A
379 388Right-handed alpha
Helix 16
AB7
C
93 111Right-handed alpha
Helix 17
AB8
C
120 126Right-handed alpha
Helix 18
AB9
C
129 135Right-handed alpha
Helix 19
AC1
C
147 152Right-handed alpha
Helix 20
AC2
C
152 157Right-handed alpha
Helix 21
AC3
C
157 162Right-handed alpha
Helix 22
AC4
C
183 187Right-handed 310
Helix 23
AC5
B
48 59Right-handed alpha
Helix 24
AC6
B
89 96Right-handed alpha
Helix 25
AC7
B
101 122Right-handed alpha
Helix 26
AC8
B
139 142Right-handed 310
Helix 27
AC9
B
181 186Right-handed alpha
Helix 28
AD1
B
191 209Right-handed alpha
Helix 29
AD2
B
225 235Right-handed alpha
Helix 30
AD3
B
236 241Right-handed alpha
Helix 31
AD4
B
245 258Right-handed alpha
Helix 32
AD5
B
265 280Right-handed alpha
Helix 33
AD6
B
288 311Right-handed alpha
Helix 34
AD7
B
327 344Right-handed alpha
Helix 35
AD8
B
360 365Right-handed alpha
Helix 36
AD9
B
365 373Right-handed alpha
Helix 37
AE1
B
379 387Right-handed alpha
Helix 38
AE2
D
93 111Right-handed alpha
Helix 39
AE3
D
120 127Right-handed alpha
Helix 40
AE4
D
129 135Right-handed alpha
Helix 41
AE5
D
136 140Right-handed 310
Helix 42
AE6
D
147 152Right-handed alpha
Helix 43
AE7
D
152 157Right-handed alpha
Helix 44
AE8
D
157 162Right-handed alpha
Helix 45
AE9
D
183 187Right-handed 310
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There are 6 sheets in PDB entry 5CZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
9 16anti-parallel
Strand 3
A
21 28anti-parallel
Strand 4
A
34 41anti-parallel
Strand 5
A
77 83anti-parallel
Strand 6
A
68 74anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 88first strand
Strand 2
A
134 137anti-parallel
Strand 3
A
145 147anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
154 155anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 5first strand
Strand 2
B
9 18anti-parallel
Strand 3
B
21 28anti-parallel
Strand 4
B
34 41anti-parallel
Strand 5
B
77 83anti-parallel
Strand 6
B
68 74anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 88first strand
Strand 2
B
134 137anti-parallel
Strand 3
B
145 147anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
154 155anti-parallel
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