Analysis of interatomic Contacts of Structural Units in PDB entry:
5CZW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CZW entry

There are 6 chains in PDB entry 5CZW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6ALA 25
A
 VAL 27THR 46
A
 TRP 48VAL 69
A
 GLN 71SER 180
A
 LYS 182ASP 233
A
 GLN 235ARG 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5CZW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 74Right-handed alpha
Helix 2
AA2
A
75 79Right-handed 310
Helix 3
AA3
A
108 115Right-handed 310
Helix 4
AA4
A
132 149Right-handed alpha
Helix 5
AA5
A
164 173Right-handed alpha
Helix 6
AA6
A
180 188Right-handed alpha
Helix 7
AA7
A
190 194Right-handed 310
Helix 8
AA8
A
213 217Right-handed 310
Helix 9
AA9
A
230 241Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5CZW.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
53 59parallel
Strand 3
A
94 97parallel
Strand 4
A
122 123parallel
Strand 5
A
105 106anti-parallel
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