Analysis of interatomic Contacts of Structural Units in PDB entry:
5D50


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5D50 entry

There are 16 chains in PDB entry 5D50 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 196
B
 LEU 67LYS 196
C
 ALA 0LYS 196
D
 LEU 67LYS 196
E
 PHE 13THR 86
G
 GLU 10THR 86
I
 MET 1LYS 196
J
 LEU 67LYS 196
K
 MET 1LYS 196
L
 LEU 67LYS 196
M
 GLU 10THR 86
O
 GLU 10THR 86
F
 PRO 20THR 86
H
 THR 19THR 86
N
 THR 19THR 86
P
 PRO 20THR 86
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 5D50. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 19Right-handed alpha
Helix 2
AA2
A
23 32Right-handed alpha
Helix 3
AA3
A
34 44Right-handed alpha
Helix 4
AA4
A
49 60Right-handed alpha
Helix 5
AA5
A
91 105Right-handed alpha
Helix 6
AA6
A
138 150Right-handed alpha
Helix 7
AA7
A
169 176Right-handed alpha
Helix 8
AA8
A
177 196Right-handed alpha
Helix 9
AA9
B
91 103Right-handed alpha
Helix 10
AB1
B
129 133Right-handed 310
Helix 11
AB2
B
138 148Right-handed alpha
Helix 12
AB3
B
153 158Right-handed alpha
Helix 13
AB4
B
169 175Right-handed alpha
Helix 14
AB5
B
177 194Right-handed alpha
Helix 15
AB6
C
3 19Right-handed alpha
Helix 16
AB7
C
24 32Right-handed alpha
Helix 17
AB8
C
34 43Right-handed alpha
Helix 18
AB9
C
49 61Right-handed alpha
Helix 19
AC1
C
65 69Right-handed 310
Helix 20
AC2
C
71 76Right-handed alpha
Helix 21
AC3
C
91 104Right-handed alpha
Helix 22
AC4
C
138 148Right-handed alpha
Helix 23
AC5
C
152 157Right-handed alpha
Helix 24
AC6
C
169 176Right-handed alpha
Helix 25
AC7
C
177 196Right-handed alpha
Helix 26
AC8
D
91 102Right-handed alpha
Helix 27
AC9
D
123 131Right-handed alpha
Helix 28
AD1
D
138 148Right-handed alpha
Helix 29
AD2
D
152 158Right-handed alpha
Helix 30
AD3
D
169 176Right-handed alpha
Helix 31
AD4
D
177 194Right-handed alpha
Helix 32
AD5
E
14 19Right-handed alpha
Helix 33
AD6
E
19 26Right-handed alpha
Helix 34
AD7
E
30 42Right-handed alpha
Helix 35
AD8
E
46 86Right-handed alpha
Helix 36
AD9
G
13 19Right-handed alpha
Helix 37
AE1
G
19 26Right-handed alpha
Helix 38
AE2
G
30 41Right-handed alpha
Helix 39
AE3
G
46 86Right-handed alpha
Helix 40
AE4
I
3 20Right-handed alpha
Helix 41
AE5
I
23 32Right-handed alpha
Helix 42
AE6
I
34 43Right-handed alpha
Helix 43
AE7
I
49 60Right-handed alpha
Helix 44
AE8
I
92 103Right-handed alpha
Helix 45
AE9
I
138 148Right-handed alpha
Helix 46
AF1
I
152 158Right-handed 310
Helix 47
AF2
I
169 175Right-handed alpha
Helix 48
AF3
I
177 194Right-handed alpha
Helix 49
AF4
J
91 104Right-handed alpha
Helix 50
AF5
J
123 133Right-handed alpha
Helix 51
AF6
J
138 148Right-handed alpha
Helix 52
AF7
J
152 157Right-handed 310
Helix 53
AF8
J
169 176Right-handed alpha
Helix 54
AF9
J
177 194Right-handed alpha
Helix 55
AG1
K
3 20Right-handed alpha
Helix 56
AG2
K
23 32Right-handed alpha
Helix 57
AG3
K
34 43Right-handed alpha
Helix 58
AG4
K
49 60Right-handed alpha
Helix 59
AG5
K
65 69Right-handed 310
Helix 60
AG6
K
91 101Right-handed alpha
Helix 61
AG7
K
131 135Right-handed 310
Helix 62
AG8
K
139 148Right-handed alpha
Helix 63
AG9
K
152 157Right-handed 310
Helix 64
AH1
K
169 175Right-handed alpha
Helix 65
AH2
K
177 194Right-handed alpha
Helix 66
AH3
L
91 103Right-handed alpha
Helix 67
AH4
L
126 131Right-handed alpha
Helix 68
AH5
L
138 148Right-handed alpha
Helix 69
AH6
L
152 157Right-handed alpha
Helix 70
AH7
L
169 176Right-handed alpha
Helix 71
AH8
L
177 195Right-handed alpha
Helix 72
AH9
M
12 17Right-handed alpha
Helix 73
AI1
M
19 26Right-handed alpha
Helix 74
AI2
M
30 42Right-handed alpha
Helix 75
AI3
M
46 68Right-handed alpha
Helix 76
AI4
M
70 86Right-handed alpha
Helix 77
AI5
O
13 18Right-handed alpha
Helix 78
AI6
O
19 25Right-handed alpha
Helix 79
AI7
O
30 42Right-handed alpha
Helix 80
AI8
O
47 85Right-handed alpha
Helix 81
AI9
F
21 29Right-handed alpha
Helix 82
AJ1
F
30 40Right-handed alpha
Helix 83
AJ2
F
46 86Right-handed alpha
Helix 84
AJ3
H
20 26Right-handed alpha
Helix 85
AJ4
H
30 42Right-handed alpha
Helix 86
AJ5
H
46 86Right-handed alpha
Helix 87
AJ6
N
20 26Right-handed alpha
Helix 88
AJ7
N
30 42Right-handed alpha
Helix 89
AJ8
N
46 68Right-handed alpha
Helix 90
AJ9
N
69 86Right-handed alpha
Helix 91
AK1
P
21 27Right-handed alpha
Helix 92
AK2
P
30 42Right-handed alpha
Helix 93
AK3
P
47 86Right-handed alpha
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There are no sheets in PDB entry 5D50
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