Analysis of interatomic Contacts of Structural Units in PDB entry:
5DAJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5DAJ entry

There are 7 chains in PDB entry 5DAJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5TRP 205
B
 ASP 7TRP 205
C
 LYS 5TRP 205
D
 ASP 7TRP 205
E
 SER 8TRP 205
F
 ASP 7TRP 205
G
 SER 8SER 82
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 5DAJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 27Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
43 52Right-handed alpha
Helix 4
AA4
A
53 64Right-handed alpha
Helix 5
AA5
A
68 77Right-handed alpha
Helix 6
AA6
A
83 102Right-handed alpha
Helix 7
AA7
A
102 115Right-handed alpha
Helix 8
AA8
A
119 121Right-handed 310
Helix 9
AA9
A
122 146Right-handed alpha
Helix 10
AB1
A
146 151Right-handed alpha
Helix 11
AB2
A
158 180Right-handed alpha
Helix 12
AB3
A
185 202Right-handed alpha
Helix 13
AB4
B
8 27Right-handed alpha
Helix 14
AB5
B
32 41Right-handed alpha
Helix 15
AB6
B
43 52Right-handed alpha
Helix 16
AB7
B
53 64Right-handed alpha
Helix 17
AB8
B
68 77Right-handed alpha
Helix 18
AB9
B
83 102Right-handed alpha
Helix 19
AC1
B
102 115Right-handed alpha
Helix 20
AC2
B
119 121Right-handed 310
Helix 21
AC3
B
122 146Right-handed alpha
Helix 22
AC4
B
146 151Right-handed alpha
Helix 23
AC5
B
158 180Right-handed alpha
Helix 24
AC6
B
185 202Right-handed alpha
Helix 25
AC7
C
6 27Right-handed alpha
Helix 26
AC8
C
32 41Right-handed alpha
Helix 27
AC9
C
43 52Right-handed alpha
Helix 28
AD1
C
53 64Right-handed alpha
Helix 29
AD2
C
68 76Right-handed alpha
Helix 30
AD3
C
84 102Right-handed alpha
Helix 31
AD4
C
102 115Right-handed alpha
Helix 32
AD5
C
119 121Right-handed 310
Helix 33
AD6
C
122 146Right-handed alpha
Helix 34
AD7
C
146 151Right-handed alpha
Helix 35
AD8
C
158 180Right-handed alpha
Helix 36
AD9
C
185 202Right-handed alpha
Helix 37
AE1
D
8 27Right-handed alpha
Helix 38
AE2
D
32 41Right-handed alpha
Helix 39
AE3
D
43 52Right-handed alpha
Helix 40
AE4
D
53 64Right-handed alpha
Helix 41
AE5
D
68 75Right-handed alpha
Helix 42
AE6
D
84 102Right-handed alpha
Helix 43
AE7
D
102 115Right-handed alpha
Helix 44
AE8
D
119 121Right-handed 310
Helix 45
AE9
D
122 146Right-handed alpha
Helix 46
AF1
D
146 151Right-handed alpha
Helix 47
AF2
D
158 180Right-handed alpha
Helix 48
AF3
D
185 202Right-handed alpha
Helix 49
AF4
E
9 27Right-handed alpha
Helix 50
AF5
E
32 41Right-handed alpha
Helix 51
AF6
E
43 52Right-handed alpha
Helix 52
AF7
E
53 64Right-handed alpha
Helix 53
AF8
E
68 77Right-handed alpha
Helix 54
AF9
E
84 102Right-handed alpha
Helix 55
AG1
E
102 115Right-handed alpha
Helix 56
AG2
E
119 121Right-handed 310
Helix 57
AG3
E
122 146Right-handed alpha
Helix 58
AG4
E
146 151Right-handed alpha
Helix 59
AG5
E
158 180Right-handed alpha
Helix 60
AG6
E
185 202Right-handed alpha
Helix 61
AG7
F
8 27Right-handed alpha
Helix 62
AG8
F
32 41Right-handed alpha
Helix 63
AG9
F
43 52Right-handed alpha
Helix 64
AH1
F
53 64Right-handed alpha
Helix 65
AH2
F
68 76Right-handed alpha
Helix 66
AH3
F
84 102Right-handed alpha
Helix 67
AH4
F
102 115Right-handed alpha
Helix 68
AH5
F
119 121Right-handed 310
Helix 69
AH6
F
122 146Right-handed alpha
Helix 70
AH7
F
146 151Right-handed alpha
Helix 71
AH8
F
158 180Right-handed alpha
Helix 72
AH9
F
185 202Right-handed alpha
Helix 73
AI1
G
9 27Right-handed alpha
Helix 74
AI2
G
32 41Right-handed alpha
Helix 75
AI3
G
43 52Right-handed alpha
Helix 76
AI4
G
53 64Right-handed alpha
Helix 77
AI5
G
68 77Right-handed alpha
Helix 78
AI6
G
83 102Right-handed alpha
Helix 79
AI7
G
102 115Right-handed alpha
Helix 80
AI8
G
119 121Right-handed 310
Helix 81
AI9
G
122 146Right-handed alpha
Helix 82
AJ1
G
146 151Right-handed alpha
Helix 83
AJ2
G
158 180Right-handed alpha
Helix 84
AJ3
G
185 202Right-handed alpha
Helix 85
AJ4
H
7 27Right-handed alpha
Helix 86
AJ5
H
32 41Right-handed alpha
Helix 87
AJ6
H
43 52Right-handed alpha
Helix 88
AJ7
H
53 64Right-handed alpha
Helix 89
AJ8
H
68 77Right-handed alpha
Helix 90
AJ9
H
84 102Right-handed alpha
Helix 91
AK1
H
102 115Right-handed alpha
Helix 92
AK2
H
119 121Right-handed 310
Helix 93
AK3
H
122 145Right-handed alpha
Helix 94
AK4
H
146 151Right-handed alpha
Helix 95
AK5
H
158 180Right-handed alpha
Helix 96
AK6
H
185 202Right-handed alpha
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There are no sheets in PDB entry 5DAJ
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