Analysis of interatomic Contacts of Structural Units in PDB entry:
5DBK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5DBK entry

There are 2 chains in PDB entry 5DBK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 64ASN 418
B
 ASP 67ASN 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5DBK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 85Right-handed alpha
Helix 2
AA2
A
87 100Right-handed alpha
Helix 3
AA3
A
107 125Right-handed alpha
Helix 4
AA4
A
127 137Right-handed alpha
Helix 5
AA5
A
141 145Right-handed 310
Helix 6
AA6
A
146 164Right-handed alpha
Helix 7
AA7
A
166 184Right-handed alpha
Helix 8
AA8
A
188 202Right-handed alpha
Helix 9
AA9
A
204 222Right-handed alpha
Helix 10
AB1
A
224 242Right-handed alpha
Helix 11
AB2
A
244 259Right-handed alpha
Helix 12
AB3
A
260 262Right-handed 310
Helix 13
AB4
A
264 284Right-handed alpha
Helix 14
AB5
A
285 298Right-handed alpha
Helix 15
AB6
A
304 321Right-handed alpha
Helix 16
AB7
A
323 341Right-handed alpha
Helix 17
AB8
A
344 360Right-handed alpha
Helix 18
AB9
A
361 372Right-handed alpha
Helix 19
AC1
A
372 380Right-handed alpha
Helix 20
AC2
A
382 400Right-handed alpha
Helix 21
AC3
A
402 416Right-handed alpha
Helix 22
AC4
A
417 418Right-handed 310
Helix 23
AC5
B
67 68Right-handed 310
Helix 24
AC6
B
69 85Right-handed alpha
Helix 25
AC7
B
87 102Right-handed alpha
Helix 26
AC8
B
107 125Right-handed alpha
Helix 27
AC9
B
127 142Right-handed alpha
Helix 28
AD1
B
143 145Right-handed 310
Helix 29
AD2
B
146 164Right-handed alpha
Helix 30
AD3
B
166 184Right-handed alpha
Helix 31
AD4
B
188 202Right-handed alpha
Helix 32
AD5
B
204 222Right-handed alpha
Helix 33
AD6
B
224 242Right-handed alpha
Helix 34
AD7
B
244 258Right-handed alpha
Helix 35
AD8
B
264 283Right-handed alpha
Helix 36
AD9
B
285 300Right-handed alpha
Helix 37
AE1
B
304 321Right-handed alpha
Helix 38
AE2
B
323 339Right-handed alpha
Helix 39
AE3
B
344 360Right-handed alpha
Helix 40
AE4
B
361 372Right-handed alpha
Helix 41
AE5
B
372 377Right-handed alpha
Helix 42
AE6
B
383 400Right-handed alpha
Helix 43
AE7
B
402 417Right-handed alpha
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There are no sheets in PDB entry 5DBK
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