Analysis of interatomic Contacts of Structural Units in PDB entry:
5DIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5DIL entry

There are 2 chains in PDB entry 5DIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 141GLU 277
B
 HIS 141PRO 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5DIL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
151 156Right-handed alpha
Helix 2
AA2
A
229 231Right-handed 310
Helix 3
AA3
A
232 248Right-handed alpha
Helix 4
AA4
A
258 268Right-handed alpha
Helix 5
AA5
A
270 274Right-handed 310
Helix 6
AA6
B
153 157Right-handed 310
Helix 7
AA7
B
229 231Right-handed 310
Helix 8
AA8
B
232 246Right-handed alpha
Helix 9
AA9
B
247 249Right-handed 310
Helix 10
AB1
B
258 268Right-handed alpha
Helix 11
AB2
B
270 274Right-handed 310
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There are 2 sheets in PDB entry 5DIL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 148first strand
Strand 2
A
185 195anti-parallel
Strand 3
A
201 212anti-parallel
Strand 4
A
218 224anti-parallel
Strand 5
A
171 176anti-parallel
Strand 6
A
163 168anti-parallel
Strand 7
B
163 168anti-parallel
Strand 8
B
171 176anti-parallel
Strand 9
B
218 224anti-parallel
Strand 10
B
201 212anti-parallel
Strand 11
B
185 195anti-parallel
Strand 12
B
144 147anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
185 195parallel
Strand 3
A
201 212anti-parallel
Strand 4
A
218 224anti-parallel
Strand 5
A
171 176anti-parallel
Strand 6
A
163 168anti-parallel
Strand 7
B
163 168anti-parallel
Strand 8
B
171 176anti-parallel
Strand 9
B
218 224anti-parallel
Strand 10
B
201 212anti-parallel
Strand 11
B
185 195anti-parallel
Strand 12
B
255 257parallel
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