Analysis of interatomic Contacts of Structural Units in PDB entry:
5DL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5DL7 entry

There is 1 chain in PDB entry 5DL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3PHE 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 5DL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 73Right-handed 310
Helix 2
AA2
A
169 173Right-handed 310
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There are 4 sheets in PDB entry 5DL7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 19 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 21first strand
Strand 2
A
31 43anti-parallel
Strand 3
A
51 64anti-parallel
Strand 4
A
90 102anti-parallel
Strand 5
A
105 112anti-parallel
Strand 6
A
130 138anti-parallel
Strand 7
A
144 155anti-parallel
Strand 8
A
183 191anti-parallel
Strand 9
A
195 204anti-parallel
Strand 10
A
208 220anti-parallel
Strand 11
A
225 238anti-parallel
Strand 12
A
248 260anti-parallel
Strand 13
A
263 273anti-parallel
Strand 14
A
303 312anti-parallel
Strand 15
A
326 338anti-parallel
Strand 16
A
348 360anti-parallel
Strand 17
A
369 380anti-parallel
Strand 18
A
391 403anti-parallel
Strand 19
A
7 21anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
119 120anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
178 179anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
A
321 322anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il