Analysis of interatomic Contacts of Structural Units in PDB entry:
5DLB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5DLB entry

There is 1 chain in PDB entry 5DLB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5PHE 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5DLB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 23Right-handed alpha
Helix 2
AA2
A
28 32Right-handed 310
Helix 3
AA3
A
39 57Right-handed alpha
Helix 4
AA4
A
67 79Right-handed alpha
Helix 5
AA5
A
143 145Right-handed 310
Helix 6
AA6
A
146 153Right-handed alpha
Helix 7
AA7
A
170 182Right-handed alpha
Helix 8
AA8
A
185 194Right-handed alpha
Helix 9
AA9
A
196 198Right-handed 310
Helix 10
AB1
A
199 207Right-handed alpha
Helix 11
AB2
A
263 277Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5DLB.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
133 139anti-parallel
Strand 3
A
124 130anti-parallel
Strand 4
A
101 107anti-parallel
Strand 5
A
82 89anti-parallel
Strand 6
A
212 220anti-parallel
Strand 7
A
233 238anti-parallel
Strand 8
A
241 249anti-parallel
Strand 9
A
255 261anti-parallel
Strand 10
A
166 169anti-parallel
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