Analysis of interatomic Contacts of Structural Units in PDB entry:
5DW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5DW1 entry

There are 4 chains in PDB entry 5DW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 345ASP 455
B
 LEU 346ASP 455
C
 LEU 346ASP 455
D
 LEU 346ASP 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5DW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
347 361Right-handed alpha
Helix 2
AA2
A
362 364Right-handed 310
Helix 3
AA3
A
365 370Right-handed alpha
Helix 4
AA4
A
371 373Right-handed 310
Helix 5
AA5
A
377 382Right-handed alpha
Helix 6
AA6
A
385 390Right-handed alpha
Helix 7
AA7
A
395 405Right-handed alpha
Helix 8
AA8
A
410 429Right-handed alpha
Helix 9
AA9
A
433 452Right-handed alpha
Helix 10
AB1
B
347 361Right-handed alpha
Helix 11
AB2
B
362 364Right-handed 310
Helix 12
AB3
B
365 370Right-handed alpha
Helix 13
AB4
B
371 373Right-handed 310
Helix 14
AB5
B
377 382Right-handed alpha
Helix 15
AB6
B
385 390Right-handed alpha
Helix 16
AB7
B
395 405Right-handed alpha
Helix 17
AB8
B
410 429Right-handed alpha
Helix 18
AB9
B
433 452Right-handed alpha
Helix 19
AC1
C
347 361Right-handed alpha
Helix 20
AC2
C
362 364Right-handed 310
Helix 21
AC3
C
365 370Right-handed alpha
Helix 22
AC4
C
371 373Right-handed 310
Helix 23
AC5
C
385 390Right-handed alpha
Helix 24
AC6
C
395 405Right-handed alpha
Helix 25
AC7
C
410 429Right-handed alpha
Helix 26
AC8
C
433 452Right-handed alpha
Helix 27
AC9
D
347 361Right-handed alpha
Helix 28
AD1
D
362 364Right-handed 310
Helix 29
AD2
D
365 370Right-handed alpha
Helix 30
AD3
D
371 373Right-handed 310
Helix 31
AD4
D
377 382Right-handed alpha
Helix 32
AD5
D
385 390Right-handed alpha
Helix 33
AD6
D
395 405Right-handed alpha
Helix 34
AD7
D
410 429Right-handed alpha
Helix 35
AD8
D
433 452Right-handed alpha
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There are no sheets in PDB entry 5DW1
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