Analysis of interatomic Contacts of Structural Units in PDB entry:
5E06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E06 entry

There is 1 chain in PDB entry 5E06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 114LEU 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5E06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
118 128Right-handed alpha
Helix 2
AA2
A
130 144Right-handed alpha
Helix 3
AA3
A
144 151Right-handed alpha
Helix 4
AA4
A
194 206Right-handed alpha
Helix 5
AA5
A
206 213Right-handed alpha
Helix 6
AA6
A
217 222Right-handed alpha
Helix 7
AA7
A
224 230Right-handed alpha
Helix 8
AA8
A
231 242Right-handed alpha
Helix 9
AA9
A
252 259Right-handed 310
Helix 10
AB1
A
260 273Right-handed alpha
Helix 11
AB2
A
274 276Right-handed 310
Helix 12
AB3
A
277 290Right-handed alpha
Helix 13
AB4
A
302 308Right-handed 310
Helix 14
AB5
A
315 319Right-handed 310
Helix 15
AB6
A
323 342Right-handed alpha
Helix 16
AB7
A
359 370Right-handed alpha
Helix 17
AB8
A
376 394Right-handed alpha
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There are 2 sheets in PDB entry 5E06. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 159first strand
Strand 2
A
177 180anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 168first strand
Strand 2
A
171 174anti-parallel
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