Analysis of interatomic Contacts of Structural Units in PDB entry:
5E0K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5E0K entry

There are 7 chains in PDB entry 5E0K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 248
B	MET 1	HIS 81
B	THR 83	SER 385
C	MET 1	ILE 248
D	MET 1	HIS 81
D	THR 83	SER 385
E	MET 1	SER 54

There are195 helices in PDB entry 5E0K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	29	Right-handed alpha
Helix 2	AA2	A	30	32	Right-handed 310
Helix 3	AA3	A	48	61	Right-handed alpha
Helix 4	AA4	A	65	77	Right-handed alpha
Helix 5	AA5	A	88	96	Right-handed alpha
Helix 6	AA6	A	96	108	Right-handed alpha
Helix 7	AA7	A	119	121	Right-handed 310
Helix 8	AA8	A	122	133	Right-handed alpha
Helix 9	AA9	A	145	156	Right-handed alpha
Helix 10	AB1	A	176	190	Right-handed alpha
Helix 11	AB2	A	202	212	Right-handed alpha
Helix 12	AB3	A	220	231	Right-handed alpha
Helix 13	AB4	A	234	247	Right-handed alpha
Helix 14	AB5	B	12	14	Right-handed 310
Helix 15	AB6	B	15	30	Right-handed alpha
Helix 16	AB7	B	32	46	Right-handed alpha
Helix 17	AB8	B	56	64	Right-handed alpha
Helix 18	AB9	B	74	76	Right-handed 310
Helix 19	AC1	B	81	96	Right-handed alpha
Helix 20	AC2	B	108	121	Right-handed alpha
Helix 21	AC3	B	131	137	Right-handed alpha
Helix 22	AC4	B	137	147	Right-handed alpha
Helix 23	AC5	B	160	176	Right-handed alpha
Helix 24	AC6	B	191	216	Right-handed alpha
Helix 25	AC7	B	229	237	Right-handed alpha
Helix 26	AC8	B	238	240	Right-handed 310
Helix 27	AC9	B	264	269	Right-handed alpha
Helix 28	AD1	B	296	300	Right-handed 310
Helix 29	AD2	B	305	314	Right-handed alpha
Helix 30	AD3	B	324	339	Right-handed alpha
Helix 31	AD4	B	343	359	Right-handed alpha
Helix 32	AD5	B	377	385	Right-handed alpha
Helix 33	AD6	C	17	29	Right-handed alpha
Helix 34	AD7	C	48	61	Right-handed alpha
Helix 35	AD8	C	64	77	Right-handed alpha
Helix 36	AD9	C	88	96	Right-handed alpha
Helix 37	AE1	C	96	108	Right-handed alpha
Helix 38	AE2	C	122	132	Right-handed alpha
Helix 39	AE3	C	145	156	Right-handed alpha
Helix 40	AE4	C	176	190	Right-handed alpha
Helix 41	AE5	C	202	212	Right-handed alpha
Helix 42	AE6	C	220	231	Right-handed alpha
Helix 43	AE7	C	234	247	Right-handed alpha
Helix 44	AE8	D	12	14	Right-handed 310
Helix 45	AE9	D	15	30	Right-handed alpha
Helix 46	AF1	D	32	46	Right-handed alpha
Helix 47	AF2	D	56	64	Right-handed alpha
Helix 48	AF3	D	74	76	Right-handed 310
Helix 49	AF4	D	81	96	Right-handed alpha
Helix 50	AF5	D	108	122	Right-handed alpha
Helix 51	AF6	D	131	137	Right-handed alpha
Helix 52	AF7	D	137	147	Right-handed alpha
Helix 53	AF8	D	160	176	Right-handed alpha
Helix 54	AF9	D	191	201	Right-handed alpha
Helix 55	AG1	D	201	216	Right-handed alpha
Helix 56	AG2	D	229	237	Right-handed alpha
Helix 57	AG3	D	238	240	Right-handed 310
Helix 58	AG4	D	264	269	Right-handed alpha
Helix 59	AG5	D	296	300	Right-handed 310
Helix 60	AG6	D	305	314	Right-handed alpha
Helix 61	AG7	D	324	339	Right-handed alpha
Helix 62	AG8	D	343	359	Right-handed alpha
Helix 63	AG9	D	377	385	Right-handed alpha
Helix 64	AH1	E	17	29	Right-handed alpha
Helix 65	AH2	E	30	32	Right-handed 310
Helix 66	AH3	E	48	61	Right-handed alpha
Helix 67	AH4	E	64	76	Right-handed alpha
Helix 68	AH5	E	89	96	Right-handed alpha
Helix 69	AH6	E	96	108	Right-handed alpha
Helix 70	AH7	E	118	121	Right-handed 310
Helix 71	AH8	E	122	132	Right-handed alpha
Helix 72	AH9	E	145	156	Right-handed alpha
Helix 73	AI1	E	176	190	Right-handed alpha
Helix 74	AI2	E	202	212	Right-handed alpha
Helix 75	AI3	E	220	231	Right-handed alpha
Helix 76	AI4	E	234	247	Right-handed alpha
Helix 77	AI5	F	12	14	Right-handed 310
Helix 78	AI6	F	15	30	Right-handed alpha
Helix 79	AI7	F	32	46	Right-handed alpha
Helix 80	AI8	F	56	64	Right-handed alpha
Helix 81	AI9	F	74	76	Right-handed 310
Helix 82	AJ1	F	81	96	Right-handed alpha
Helix 83	AJ2	F	108	122	Right-handed alpha
Helix 84	AJ3	F	131	137	Right-handed alpha
Helix 85	AJ4	F	137	147	Right-handed alpha
Helix 86	AJ5	F	160	176	Right-handed alpha
Helix 87	AJ6	F	191	216	Right-handed alpha
Helix 88	AJ7	F	229	237	Right-handed alpha
Helix 89	AJ8	F	238	240	Right-handed 310
Helix 90	AJ9	F	264	269	Right-handed alpha
Helix 91	AK1	F	296	300	Right-handed 310
Helix 92	AK2	F	305	314	Right-handed alpha
Helix 93	AK3	F	324	339	Right-handed alpha
Helix 94	AK4	F	343	359	Right-handed alpha
Helix 95	AK5	F	377	385	Right-handed alpha
Helix 96	AK6	G	17	29	Right-handed alpha
Helix 97	AK7	G	48	61	Right-handed alpha
Helix 98	AK8	G	65	77	Right-handed alpha
Helix 99	AK9	G	89	96	Right-handed alpha
Helix 100	AL1	G	96	108	Right-handed alpha
Helix 101	AL2	G	118	121	Right-handed 310
Helix 102	AL3	G	122	132	Right-handed alpha
Helix 103	AL4	G	145	156	Right-handed alpha
Helix 104	AL5	G	176	190	Right-handed alpha
Helix 105	AL6	G	202	212	Right-handed alpha
Helix 106	AL7	G	220	231	Right-handed alpha
Helix 107	AL8	G	234	247	Right-handed alpha
Helix 108	AL9	H	12	14	Right-handed 310
Helix 109	AM1	H	15	30	Right-handed alpha
Helix 110	AM2	H	32	46	Right-handed alpha
Helix 111	AM3	H	56	64	Right-handed alpha
Helix 112	AM4	H	73	76	Right-handed 310
Helix 113	AM5	H	81	96	Right-handed alpha
Helix 114	AM6	H	108	121	Right-handed alpha
Helix 115	AM7	H	131	137	Right-handed alpha
Helix 116	AM8	H	137	147	Right-handed alpha
Helix 117	AM9	H	160	176	Right-handed alpha
Helix 118	AN1	H	191	201	Right-handed alpha
Helix 119	AN2	H	201	216	Right-handed alpha
Helix 120	AN3	H	229	237	Right-handed alpha
Helix 121	AN4	H	238	240	Right-handed 310
Helix 122	AN5	H	256	260	Right-handed 310
Helix 123	AN6	H	264	269	Right-handed alpha
Helix 124	AN7	H	296	300	Right-handed 310
Helix 125	AN8	H	305	314	Right-handed alpha
Helix 126	AN9	H	324	339	Right-handed alpha
Helix 127	AO1	H	343	360	Right-handed alpha
Helix 128	AO2	H	374	376	Right-handed 310
Helix 129	AO3	H	377	385	Right-handed alpha
Helix 130	AO4	I	17	29	Right-handed alpha
Helix 131	AO5	I	30	32	Right-handed 310
Helix 132	AO6	I	48	61	Right-handed alpha
Helix 133	AO7	I	64	77	Right-handed alpha
Helix 134	AO8	I	88	96	Right-handed alpha
Helix 135	AO9	I	96	108	Right-handed alpha
Helix 136	AP1	I	118	121	Right-handed 310
Helix 137	AP2	I	122	133	Right-handed alpha
Helix 138	AP3	I	145	156	Right-handed alpha
Helix 139	AP4	I	176	190	Right-handed alpha
Helix 140	AP5	I	202	212	Right-handed alpha
Helix 141	AP6	I	220	231	Right-handed alpha
Helix 142	AP7	I	234	247	Right-handed alpha
Helix 143	AP8	J	12	14	Right-handed 310
Helix 144	AP9	J	15	30	Right-handed alpha
Helix 145	AQ1	J	32	46	Right-handed alpha
Helix 146	AQ2	J	56	64	Right-handed alpha
Helix 147	AQ3	J	73	76	Right-handed 310
Helix 148	AQ4	J	81	96	Right-handed alpha
Helix 149	AQ5	J	108	121	Right-handed alpha
Helix 150	AQ6	J	131	137	Right-handed alpha
Helix 151	AQ7	J	137	147	Right-handed alpha
Helix 152	AQ8	J	160	176	Right-handed alpha
Helix 153	AQ9	J	191	201	Right-handed alpha
Helix 154	AR1	J	201	216	Right-handed alpha
Helix 155	AR2	J	229	237	Right-handed alpha
Helix 156	AR3	J	238	240	Right-handed 310
Helix 157	AR4	J	264	269	Right-handed alpha
Helix 158	AR5	J	296	300	Right-handed 310
Helix 159	AR6	J	305	314	Right-handed alpha
Helix 160	AR7	J	324	339	Right-handed alpha
Helix 161	AR8	J	343	359	Right-handed alpha
Helix 162	AR9	J	374	376	Right-handed 310
Helix 163	AS1	J	377	385	Right-handed alpha
Helix 164	AS2	K	17	28	Right-handed alpha
Helix 165	AS3	K	48	62	Right-handed alpha
Helix 166	AS4	K	65	76	Right-handed alpha
Helix 167	AS5	K	88	96	Right-handed alpha
Helix 168	AS6	K	96	108	Right-handed alpha
Helix 169	AS7	K	122	132	Right-handed alpha
Helix 170	AS8	K	145	156	Right-handed alpha
Helix 171	AS9	K	176	190	Right-handed alpha
Helix 172	AT1	K	202	213	Right-handed alpha
Helix 173	AT2	K	220	231	Right-handed alpha
Helix 174	AT3	K	234	247	Right-handed alpha
Helix 175	AT4	L	12	14	Right-handed 310
Helix 176	AT5	L	15	30	Right-handed alpha
Helix 177	AT6	L	32	46	Right-handed alpha
Helix 178	AT7	L	56	64	Right-handed alpha
Helix 179	AT8	L	73	76	Right-handed 310
Helix 180	AT9	L	81	97	Right-handed alpha
Helix 181	AU1	L	108	121	Right-handed alpha
Helix 182	AU2	L	131	137	Right-handed alpha
Helix 183	AU3	L	137	147	Right-handed alpha
Helix 184	AU4	L	160	176	Right-handed alpha
Helix 185	AU5	L	191	201	Right-handed alpha
Helix 186	AU6	L	201	216	Right-handed alpha
Helix 187	AU7	L	229	237	Right-handed alpha
Helix 188	AU8	L	238	240	Right-handed 310
Helix 189	AU9	L	264	269	Right-handed alpha
Helix 190	AV1	L	296	300	Right-handed 310
Helix 191	AV2	L	305	314	Right-handed alpha
Helix 192	AV3	L	324	339	Right-handed alpha
Helix 193	AV4	L	343	359	Right-handed alpha
Helix 194	AV5	L	374	376	Right-handed 310
Helix 195	AV6	L	377	385	Right-handed alpha

There are 28 sheets in PDB entry 5E0K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	6	12	first strand
Strand 2	A	35	38	parallel
Strand 3	A	83	87	parallel
Strand 4	A	111	114	parallel
Strand 5	A	135	140	parallel
Strand 6	A	159	163	parallel
Strand 7	A	193	197	parallel
Strand 8	A	216	219	parallel
Strand 9	A	6	12	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	3	first strand
Strand 2	B	6	7	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	67	72	anti-parallel
Strand 3	B	365	370	parallel
Strand 4	B	221	225	parallel
Strand 5	B	246	254	parallel
Strand 6	B	318	323	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	154	first strand
Strand 2	B	124	130	parallel
Strand 3	B	100	105	parallel
Strand 4	B	179	181	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	274	first strand
Strand 2	B	277	281	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	136	first strand
Strand 2	C	111	114	parallel
Strand 3	C	83	87	parallel
Strand 4	C	35	38	parallel
Strand 5	C	6	12	parallel
Strand 6	C	216	219	parallel
Strand 7	C	194	197	parallel
Strand 8	C	160	163	parallel
Strand 9	C	138	140	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	3	first strand
Strand 2	D	6	7	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	67	72	anti-parallel
Strand 3	D	365	370	parallel
Strand 4	D	221	225	parallel
Strand 5	D	246	254	parallel
Strand 6	D	317	323	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	154	first strand
Strand 2	D	124	130	parallel
Strand 3	D	100	105	parallel
Strand 4	D	179	181	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	274	first strand
Strand 2	D	277	281	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	12	first strand
Strand 2	E	35	38	parallel
Strand 3	E	83	87	parallel
Strand 4	E	111	114	parallel
Strand 5	E	135	140	parallel
Strand 6	E	159	163	parallel
Strand 7	E	194	197	parallel
Strand 8	E	216	219	parallel
Strand 9	E	6	12	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	3	first strand
Strand 2	F	6	10	anti-parallel
Strand 3	F	276	281	anti-parallel
Strand 4	F	270	274	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	55	first strand
Strand 2	F	67	72	anti-parallel
Strand 3	F	365	370	parallel
Strand 4	F	221	225	parallel
Strand 5	F	246	254	parallel
Strand 6	F	317	323	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	154	first strand
Strand 2	F	124	130	parallel
Strand 3	F	100	105	parallel
Strand 4	F	179	181	parallel

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There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	6	12	first strand
Strand 2	G	35	38	parallel
Strand 3	G	83	87	parallel
Strand 4	G	111	114	parallel
Strand 5	G	135	140	parallel
Strand 6	G	159	163	parallel
Strand 7	G	193	197	parallel
Strand 8	G	216	219	parallel
Strand 9	G	6	12	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2	3	first strand
Strand 2	H	6	7	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	55	first strand
Strand 2	H	67	71	anti-parallel
Strand 3	H	365	369	parallel
Strand 4	H	221	225	parallel
Strand 5	H	246	254	parallel
Strand 6	H	317	323	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	150	154	first strand
Strand 2	H	124	130	parallel
Strand 3	H	100	105	parallel
Strand 4	H	179	181	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	270	274	first strand
Strand 2	H	277	281	anti-parallel

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There are 9 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	135	136	first strand
Strand 2	I	111	114	parallel
Strand 3	I	83	87	parallel
Strand 4	I	35	38	parallel
Strand 5	I	6	12	parallel
Strand 6	I	216	219	parallel
Strand 7	I	194	197	parallel
Strand 8	I	160	163	parallel
Strand 9	I	139	140	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	2	3	first strand
Strand 2	J	6	10	anti-parallel
Strand 3	J	276	281	anti-parallel
Strand 4	J	270	274	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	53	55	first strand
Strand 2	J	67	71	anti-parallel
Strand 3	J	365	369	parallel
Strand 4	J	221	225	parallel
Strand 5	J	246	254	parallel
Strand 6	J	318	323	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	150	154	first strand
Strand 2	J	124	130	parallel
Strand 3	J	100	105	parallel
Strand 4	J	179	181	parallel

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There are 9 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	6	12	first strand
Strand 2	K	35	38	parallel
Strand 3	K	83	87	parallel
Strand 4	K	111	114	parallel
Strand 5	K	135	140	parallel
Strand 6	K	159	163	parallel
Strand 7	K	193	197	parallel
Strand 8	K	216	219	parallel
Strand 9	K	6	12	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2	3	first strand
Strand 2	L	6	7	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	55	first strand
Strand 2	L	67	71	anti-parallel
Strand 3	L	365	369	parallel
Strand 4	L	221	225	parallel
Strand 5	L	246	254	parallel
Strand 6	L	317	323	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	150	154	first strand
Strand 2	L	124	130	parallel
Strand 3	L	100	105	parallel
Strand 4	L	179	181	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	270	274	first strand
Strand 2	L	277	281	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5E0K

Analysis of interatomic Contacts of Structural Units in PDB entry:
5E0K