Analysis of interatomic Contacts of Structural Units in PDB entry:
5E1G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5E1G entry

There are 2 chains in PDB entry 5E1G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 57	LYS 407
B	LEU 58	ALA 406

There are 12 helices in PDB entry 5E1G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	180	187	Right-handed alpha
Helix 2	AA2	A	306	309	Right-handed 310
Helix 3	AA3	A	339	342	Right-handed 310
Helix 4	AA4	A	358	369	Right-handed alpha
Helix 5	AA5	A	392	396	Right-handed 310
Helix 6	AA6	A	397	404	Right-handed alpha
Helix 7	AA7	B	180	187	Right-handed alpha
Helix 8	AA8	B	306	309	Right-handed 310
Helix 9	AA9	B	339	342	Right-handed 310
Helix 10	AB1	B	358	369	Right-handed alpha
Helix 11	AB2	B	392	396	Right-handed 310
Helix 12	AB3	B	397	404	Right-handed alpha

There are 14 sheets in PDB entry 5E1G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	64	first strand
Strand 2	A	80	84	anti-parallel
Strand 3	A	111	114	anti-parallel
Strand 4	A	103	105	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	94	first strand
Strand 2	A	123	132	anti-parallel
Strand 3	A	135	144	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	152	first strand
Strand 2	A	237	239	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	157	first strand
Strand 2	A	170	174	anti-parallel
Strand 3	A	207	212	anti-parallel
Strand 4	A	198	202	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	164	first strand
Strand 2	A	243	249	parallel
Strand 3	A	221	226	anti-parallel
Strand 4	A	188	193	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	277	first strand
Strand 2	A	263	268	anti-parallel
Strand 3	A	253	258	anti-parallel
Strand 4	A	374	378	parallel
Strand 5	A	290	293	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	304	first strand
Strand 2	A	319	327	anti-parallel
Strand 3	A	334	337	anti-parallel
Strand 4	A	355	357	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	64	first strand
Strand 2	B	80	83	anti-parallel
Strand 3	B	111	114	anti-parallel
Strand 4	B	103	105	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	94	first strand
Strand 2	B	123	132	anti-parallel
Strand 3	B	135	144	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	152	first strand
Strand 2	B	237	239	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	157	first strand
Strand 2	B	170	174	anti-parallel
Strand 3	B	207	212	anti-parallel
Strand 4	B	198	202	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	164	first strand
Strand 2	B	243	249	parallel
Strand 3	B	221	226	anti-parallel
Strand 4	B	188	193	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	277	first strand
Strand 2	B	263	268	anti-parallel
Strand 3	B	253	258	anti-parallel
Strand 4	B	374	378	parallel
Strand 5	B	290	293	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	297	304	first strand
Strand 2	B	319	327	anti-parallel
Strand 3	B	334	337	anti-parallel
Strand 4	B	355	357	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5E1G

Analysis of interatomic Contacts of Structural Units in PDB entry:
5E1G