Analysis of interatomic Contacts of Structural Units in PDB entry:
5E1J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E1J entry

There is 1 chain in PDB entry 5E1J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 32LYS 686
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5E1J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 46Right-handed alpha
Helix 2
AA2
A
63 92Right-handed alpha
Helix 3
AA3
A
116 137Right-handed alpha
Helix 4
AA4
A
138 140Right-handed 310
Helix 5
AA5
A
143 148Right-handed alpha
Helix 6
AA6
A
150 173Right-handed alpha
Helix 7
AA7
A
188 199Right-handed alpha
Helix 8
AA8
A
199 238Right-handed alpha
Helix 9
AA9
A
243 248Right-handed alpha
Helix 10
AB1
A
249 263Right-handed alpha
Helix 11
AB2
A
266 271Right-handed alpha
Helix 12
AB3
A
271 278Right-handed alpha
Helix 13
AB4
A
280 294Right-handed alpha
Helix 14
AB5
A
295 335Right-handed alpha
Helix 15
AB6
A
343 358Right-handed alpha
Helix 16
AB7
A
365 373Right-handed alpha
Helix 17
AB8
A
386 399Right-handed alpha
Helix 18
AB9
A
429 455Right-handed alpha
Helix 19
AC1
A
461 487Right-handed alpha
Helix 20
AC2
A
489 494Right-handed alpha
Helix 21
AC3
A
494 515Right-handed alpha
Helix 22
AC4
A
525 533Right-handed alpha
Helix 23
AC5
A
534 548Right-handed 310
Helix 24
AC6
A
551 565Right-handed alpha
Helix 25
AC7
A
565 587Right-handed alpha
Helix 26
AC8
A
597 602Right-handed alpha
Helix 27
AC9
A
605 610Right-handed alpha
Helix 28
AD1
A
615 628Right-handed alpha
Helix 29
AD2
A
632 644Right-handed alpha
Helix 30
AD3
A
645 647Right-handed 310
Helix 31
AD4
A
648 660Right-handed alpha
Helix 32
AD5
A
662 685Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5E1J.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
383 384anti-parallel
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