Analysis of interatomic Contacts of Structural Units in PDB entry:
5E2H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5E2H entry

There are 3 chains in PDB entry 5E2H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 0	ASP 353
B	ALA 0	ASP 353
C	ALA 0	ASP 353

There are 56 helices in PDB entry 5E2H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	10	Right-handed alpha
Helix 2	AA2	A	12	18	Right-handed alpha
Helix 3	AA3	A	59	75	Right-handed alpha
Helix 4	AA4	A	82	86	Right-handed 310
Helix 5	AA5	A	87	91	Right-handed 310
Helix 6	AA6	A	93	98	Right-handed 310
Helix 7	AA7	A	99	105	Right-handed alpha
Helix 8	AA8	A	121	132	Right-handed alpha
Helix 9	AA9	A	145	161	Right-handed alpha
Helix 10	AB1	A	163	172	Right-handed alpha
Helix 11	AB2	A	188	193	Right-handed 310
Helix 12	AB3	A	211	217	Right-handed alpha
Helix 13	AB4	A	221	234	Right-handed alpha
Helix 14	AB5	A	235	238	Right-handed 310
Helix 15	AB6	A	239	249	Right-handed alpha
Helix 16	AB7	A	273	281	Right-handed alpha
Helix 17	AB8	A	282	288	Right-handed alpha
Helix 18	AB9	A	337	352	Right-handed alpha
Helix 19	AC1	B	2	10	Right-handed alpha
Helix 20	AC2	B	12	18	Right-handed alpha
Helix 21	AC3	B	59	74	Right-handed alpha
Helix 22	AC4	B	82	86	Right-handed 310
Helix 23	AC5	B	87	91	Right-handed 310
Helix 24	AC6	B	93	98	Right-handed 310
Helix 25	AC7	B	99	105	Right-handed alpha
Helix 26	AC8	B	121	132	Right-handed alpha
Helix 27	AC9	B	145	161	Right-handed alpha
Helix 28	AD1	B	163	172	Right-handed alpha
Helix 29	AD2	B	188	193	Right-handed 310
Helix 30	AD3	B	211	217	Right-handed alpha
Helix 31	AD4	B	221	234	Right-handed alpha
Helix 32	AD5	B	235	238	Right-handed 310
Helix 33	AD6	B	239	248	Right-handed alpha
Helix 34	AD7	B	249	251	Right-handed 310
Helix 35	AD8	B	273	281	Right-handed alpha
Helix 36	AD9	B	282	288	Right-handed alpha
Helix 37	AE1	B	337	352	Right-handed alpha
Helix 38	AE2	C	2	10	Right-handed alpha
Helix 39	AE3	C	12	18	Right-handed alpha
Helix 40	AE4	C	59	75	Right-handed alpha
Helix 41	AE5	C	82	86	Right-handed 310
Helix 42	AE6	C	87	91	Right-handed 310
Helix 43	AE7	C	93	98	Right-handed 310
Helix 44	AE8	C	99	105	Right-handed alpha
Helix 45	AE9	C	121	132	Right-handed alpha
Helix 46	AF1	C	145	161	Right-handed alpha
Helix 47	AF2	C	163	172	Right-handed alpha
Helix 48	AF3	C	188	193	Right-handed 310
Helix 49	AF4	C	211	216	Right-handed alpha
Helix 50	AF5	C	221	234	Right-handed alpha
Helix 51	AF6	C	235	238	Right-handed 310
Helix 52	AF7	C	239	248	Right-handed alpha
Helix 53	AF8	C	249	251	Right-handed 310
Helix 54	AF9	C	273	281	Right-handed alpha
Helix 55	AG1	C	282	288	Right-handed alpha
Helix 56	AG2	C	337	352	Right-handed alpha

There are 12 sheets in PDB entry 5E2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	38	first strand
Strand 2	A	21	28	anti-parallel
Strand 3	A	326	332	anti-parallel
Strand 4	A	315	321	anti-parallel
Strand 5	A	303	310	anti-parallel
Strand 6	A	266	269	anti-parallel
Strand 7	A	259	261	anti-parallel
Strand 8	A	254	256	anti-parallel
Strand 9	A	293	294	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	219	220	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	142	first strand
Strand 2	A	290	291	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	197	first strand
Strand 2	A	203	204	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	38	first strand
Strand 2	B	21	28	anti-parallel
Strand 3	B	326	332	anti-parallel
Strand 4	B	315	321	anti-parallel
Strand 5	B	303	310	anti-parallel
Strand 6	B	266	269	anti-parallel
Strand 7	B	259	261	anti-parallel
Strand 8	B	254	256	anti-parallel
Strand 9	B	293	294	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	219	220	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	142	first strand
Strand 2	B	290	291	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	196	197	first strand
Strand 2	B	203	204	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	38	first strand
Strand 2	C	21	28	anti-parallel
Strand 3	C	326	332	anti-parallel
Strand 4	C	315	321	anti-parallel
Strand 5	C	303	310	anti-parallel
Strand 6	C	266	269	anti-parallel
Strand 7	C	259	261	anti-parallel
Strand 8	C	254	256	anti-parallel
Strand 9	C	293	294	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	219	220	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	142	first strand
Strand 2	C	290	291	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	196	197	first strand
Strand 2	C	203	204	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5E2H

Analysis of interatomic Contacts of Structural Units in PDB entry:
5E2H