Analysis of interatomic Contacts of Structural Units in PDB entry:
5E2X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5E2X entry

There are 8 chains in PDB entry 5E2X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 639	LYS 739
B	MET 639	LYS 739
C	MET 639	LYS 739
D	MET 639	LYS 739
E	GLN 646	LYS 739
F	GLN 646	LYS 739
G	MET 639	LYS 739
H	MET 639	LYS 739

There are 52 helices in PDB entry 5E2X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	647	659	Right-handed alpha
Helix 2	AA2	A	660	673	Right-handed alpha
Helix 3	AA3	A	689	693	Right-handed 310
Helix 4	AA4	A	703	710	Right-handed 310
Helix 5	AA5	A	723	725	Right-handed 310
Helix 6	AA6	A	726	738	Right-handed alpha
Helix 7	AA7	B	647	659	Right-handed alpha
Helix 8	AA8	B	660	673	Right-handed alpha
Helix 9	AA9	B	689	693	Right-handed 310
Helix 10	AB1	B	703	710	Right-handed 310
Helix 11	AB2	B	723	725	Right-handed 310
Helix 12	AB3	B	726	738	Right-handed alpha
Helix 13	AB4	C	647	660	Right-handed alpha
Helix 14	AB5	C	660	673	Right-handed alpha
Helix 15	AB6	C	689	693	Right-handed 310
Helix 16	AB7	C	701	706	Right-handed alpha
Helix 17	AB8	C	707	710	Right-handed 310
Helix 18	AB9	C	723	725	Right-handed 310
Helix 19	AC1	C	726	738	Right-handed alpha
Helix 20	AC2	D	647	659	Right-handed alpha
Helix 21	AC3	D	660	673	Right-handed alpha
Helix 22	AC4	D	689	693	Right-handed 310
Helix 23	AC5	D	701	707	Right-handed alpha
Helix 24	AC6	D	708	710	Right-handed 310
Helix 25	AC7	D	723	725	Right-handed 310
Helix 26	AC8	D	726	739	Right-handed alpha
Helix 27	AC9	E	647	660	Right-handed alpha
Helix 28	AD1	E	660	673	Right-handed alpha
Helix 29	AD2	E	689	693	Right-handed 310
Helix 30	AD3	E	701	707	Right-handed alpha
Helix 31	AD4	E	708	710	Right-handed 310
Helix 32	AD5	E	723	725	Right-handed 310
Helix 33	AD6	E	726	738	Right-handed alpha
Helix 34	AD7	F	647	659	Right-handed alpha
Helix 35	AD8	F	660	673	Right-handed alpha
Helix 36	AD9	F	689	693	Right-handed 310
Helix 37	AE1	F	701	706	Right-handed alpha
Helix 38	AE2	F	707	710	Right-handed 310
Helix 39	AE3	F	723	725	Right-handed 310
Helix 40	AE4	F	726	738	Right-handed alpha
Helix 41	AE5	G	647	659	Right-handed alpha
Helix 42	AE6	G	660	673	Right-handed alpha
Helix 43	AE7	G	689	693	Right-handed 310
Helix 44	AE8	G	703	710	Right-handed 310
Helix 45	AE9	G	723	725	Right-handed 310
Helix 46	AF1	G	726	738	Right-handed alpha
Helix 47	AF2	H	647	659	Right-handed alpha
Helix 48	AF3	H	660	673	Right-handed alpha
Helix 49	AF4	H	689	693	Right-handed 310
Helix 50	AF5	H	703	710	Right-handed 310
Helix 51	AF6	H	723	725	Right-handed 310
Helix 52	AF7	H	726	738	Right-handed alpha

There are 16 sheets in PDB entry 5E2X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	676	679	first strand
Strand 2	A	685	688	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	712	715	first strand
Strand 2	A	718	721	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	676	679	first strand
Strand 2	B	685	688	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	715	first strand
Strand 2	B	718	721	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	676	679	first strand
Strand 2	C	685	688	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	712	715	first strand
Strand 2	C	718	721	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	676	679	first strand
Strand 2	D	685	688	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	712	715	first strand
Strand 2	D	718	721	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	676	679	first strand
Strand 2	E	685	688	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	712	715	first strand
Strand 2	E	718	721	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	676	679	first strand
Strand 2	F	685	688	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	712	715	first strand
Strand 2	F	718	721	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	676	679	first strand
Strand 2	G	685	688	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	712	715	first strand
Strand 2	G	718	721	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	676	679	first strand
Strand 2	H	685	688	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	712	714	first strand
Strand 2	H	719	721	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5E2X

Analysis of interatomic Contacts of Structural Units in PDB entry:
5E2X