Analysis of interatomic Contacts of Structural Units in PDB entry:
5E37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E37 entry

There are 2 chains in PDB entry 5E37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 18GLN 335
C
 GLY 18ALA 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5E37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 39Right-handed alpha
Helix 2
AA2
A
47 57Right-handed alpha
Helix 3
AA3
A
72 84Right-handed alpha
Helix 4
AA4
A
92 102Right-handed alpha
Helix 5
AA5
A
109 121Right-handed alpha
Helix 6
AA6
A
129 140Right-handed alpha
Helix 7
AA7
A
145 157Right-handed alpha
Helix 8
AA8
A
165 175Right-handed alpha
Helix 9
AA9
A
179 189Right-handed alpha
Helix 10
AB1
A
213 223Right-handed alpha
Helix 11
AB2
A
238 255Right-handed alpha
Helix 12
AB3
A
269 278Right-handed alpha
Helix 13
AB4
A
304 314Right-handed alpha
Helix 14
AB5
A
327 331Right-handed 310
Helix 15
AB6
C
21 39Right-handed alpha
Helix 16
AB7
C
48 56Right-handed alpha
Helix 17
AB8
C
72 84Right-handed alpha
Helix 18
AB9
C
92 102Right-handed alpha
Helix 19
AC1
C
109 121Right-handed alpha
Helix 20
AC2
C
129 140Right-handed alpha
Helix 21
AC3
C
145 157Right-handed alpha
Helix 22
AC4
C
165 175Right-handed alpha
Helix 23
AC5
C
179 189Right-handed alpha
Helix 24
AC6
C
213 223Right-handed alpha
Helix 25
AC7
C
238 255Right-handed alpha
Helix 26
AC8
C
269 278Right-handed alpha
Helix 27
AC9
C
304 315Right-handed alpha
Helix 28
AD1
C
327 331Right-handed 310
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There are 3 sheets in PDB entry 5E37. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
259 265parallel
Strand 3
A
228 234parallel
Strand 4
A
287 292anti-parallel
Strand 5
A
295 301anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 47first strand
Strand 2
C
90 91anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
209 210first strand
Strand 2
C
259 265parallel
Strand 3
C
228 234parallel
Strand 4
C
287 292anti-parallel
Strand 5
C
295 301anti-parallel
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