Analysis of interatomic Contacts of Structural Units in PDB entry:
5E5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E5T entry

There are 16 chains in PDB entry 5E5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LYS 24
A
 CYS 26PRO 63
B
 GLY 1GLY 1
B
 GLY 17GLY 17
B
 GLY 27GLY 27
B
 GLY 39GLY 39
B
 GLY 42GLY 42
B
 GLY 58GLY 58
C
 SER 2LYS 24
C
 CYS 26PRO 63
D
 GLY 1GLY 1
D
 GLY 17GLY 17
D
 GLY 27GLY 27
D
 GLY 39GLY 39
D
 GLY 42GLY 42
D
 GLY 58GLY 58
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5E5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 13Right-handed alpha
Helix 2
AA2
A
18 34Right-handed alpha
Helix 3
AA3
A
43 46Right-handed 310
Helix 4
AA4
A
47 53Right-handed alpha
Helix 5
AA5
B
3 13Right-handed alpha
Helix 6
AA6
B
18 34Right-handed alpha
Helix 7
AA7
B
43 46Right-handed 310
Helix 8
AA8
B
47 53Right-handed alpha
Helix 9
AA9
C
3 13Right-handed alpha
Helix 10
AB1
C
18 34Right-handed alpha
Helix 11
AB2
C
43 46Right-handed 310
Helix 12
AB3
C
47 53Right-handed alpha
Helix 13
AB4
D
3 13Right-handed alpha
Helix 14
AB5
D
18 34Right-handed alpha
Helix 15
AB6
D
43 46Right-handed 310
Helix 16
AB7
D
47 53Right-handed alpha
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There are no sheets in PDB entry 5E5T
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il