Analysis of interatomic Contacts of Structural Units in PDB entry:
5E6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E6E entry

There are 2 chains in PDB entry 5E6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1ARG 141
B
 VAL 1HIS 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5E6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 18Right-handed alpha
Helix 2
AA2
A
20 36Right-handed alpha
Helix 3
AA3
A
37 43Right-handed 310
Helix 4
AA4
A
52 72Right-handed alpha
Helix 5
AA5
A
75 80Right-handed alpha
Helix 6
AA6
A
80 89Right-handed alpha
Helix 7
AA7
A
95 113Right-handed alpha
Helix 8
AA8
A
118 137Right-handed alpha
Helix 9
AA9
B
4 16Right-handed alpha
Helix 10
AB1
B
22 35Right-handed alpha
Helix 11
AB2
B
36 46Right-handed 310
Helix 12
AB3
B
50 57Right-handed alpha
Helix 13
AB4
B
57 76Right-handed alpha
Helix 14
AB5
B
80 93Right-handed alpha
Helix 15
AB6
B
100 119Right-handed alpha
Helix 16
AB7
B
120 122Right-handed 310
Helix 17
AB8
B
123 142Right-handed alpha
Helix 18
AB9
B
143 146Right-handed 310
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There are no sheets in PDB entry 5E6E
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il