Analysis of interatomic Contacts of Structural Units in PDB entry:
5E6S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5E6S entry

There are 3 chains in PDB entry 5E6S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 1	PRO 589
B	GLN 1	CYS 459
C	TYR 1	ILE 248

There are 95 helices in PDB entry 5E6S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	143	161	Right-handed alpha
Helix 2	AA2	A	182	190	Right-handed alpha
Helix 3	AA3	A	191	196	Right-handed alpha
Helix 4	AA4	A	207	219	Right-handed alpha
Helix 5	AA5	A	221	225	Right-handed 310
Helix 6	AA6	A	248	252	Right-handed 310
Helix 7	AA7	A	263	266	Right-handed 310
Helix 8	AA8	A	267	273	Right-handed alpha
Helix 9	AA9	A	274	278	Right-handed 310
Helix 10	AB1	A	281	285	Right-handed alpha
Helix 11	AB2	A	291	297	Right-handed 310
Helix 12	AB3	A	298	303	Right-handed alpha
Helix 13	AB4	A	344	349	Right-handed alpha
Helix 14	AB5	A	401	405	Right-handed 310
Helix 15	AB6	A	546	550	Right-handed alpha
Helix 16	AB7	B	10	17	Right-handed alpha
Helix 17	AB8	B	35	38	Right-handed 310
Helix 18	AB9	B	42	49	Right-handed alpha
Helix 19	AC1	B	52	54	Right-handed 310
Helix 20	AC2	B	114	116	Right-handed 310
Helix 21	AC3	B	117	125	Right-handed alpha
Helix 22	AC4	B	127	139	Right-handed alpha
Helix 23	AC5	B	161	167	Right-handed alpha
Helix 24	AC6	B	191	201	Right-handed alpha
Helix 25	AC7	B	213	224	Right-handed alpha
Helix 26	AC8	B	224	229	Right-handed alpha
Helix 27	AC9	B	249	255	Right-handed 310
Helix 28	AD1	B	273	276	Right-handed 310
Helix 29	AD2	B	281	292	Right-handed alpha
Helix 30	AD3	B	304	310	Right-handed alpha
Helix 31	AD4	B	310	315	Right-handed alpha
Helix 32	AD5	B	329	343	Right-handed alpha
Helix 33	AD6	C	143	161	Right-handed alpha
Helix 34	AD7	C	182	190	Right-handed alpha
Helix 35	AD8	C	191	196	Right-handed alpha
Helix 36	AD9	C	207	219	Right-handed alpha
Helix 37	AE1	C	221	225	Right-handed 310
Helix 38	AE2	C	248	252	Right-handed 310
Helix 39	AE3	C	263	266	Right-handed 310
Helix 40	AE4	C	267	273	Right-handed alpha
Helix 41	AE5	C	274	278	Right-handed 310
Helix 42	AE6	C	281	285	Right-handed alpha
Helix 43	AE7	C	291	293	Right-handed 310
Helix 44	AE8	C	294	304	Right-handed alpha
Helix 45	AE9	C	344	349	Right-handed alpha
Helix 46	AF1	C	401	405	Right-handed 310
Helix 47	AF2	C	546	550	Right-handed alpha
Helix 48	AF3	D	10	16	Right-handed alpha
Helix 49	AF4	D	35	38	Right-handed 310
Helix 50	AF5	D	42	49	Right-handed alpha
Helix 51	AF6	D	52	54	Right-handed 310
Helix 52	AF7	D	114	116	Right-handed 310
Helix 53	AF8	D	117	125	Right-handed alpha
Helix 54	AF9	D	127	139	Right-handed alpha
Helix 55	AG1	D	161	167	Right-handed alpha
Helix 56	AG2	D	191	201	Right-handed alpha
Helix 57	AG3	D	213	224	Right-handed alpha
Helix 58	AG4	D	224	229	Right-handed alpha
Helix 59	AG5	D	249	255	Right-handed 310
Helix 60	AG6	D	273	277	Right-handed 310
Helix 61	AG7	D	281	292	Right-handed alpha
Helix 62	AG8	D	304	310	Right-handed alpha
Helix 63	AG9	D	310	315	Right-handed alpha
Helix 64	AH1	D	329	343	Right-handed alpha
Helix 65	AH2	E	4	8	Right-handed 310
Helix 66	AH3	E	143	162	Right-handed alpha
Helix 67	AH4	E	182	190	Right-handed alpha
Helix 68	AH5	E	191	196	Right-handed alpha
Helix 69	AH6	E	207	219	Right-handed alpha
Helix 70	AH7	E	221	225	Right-handed 310
Helix 71	AH8	E	248	252	Right-handed 310
Helix 72	AH9	E	263	266	Right-handed 310
Helix 73	AI1	E	267	273	Right-handed alpha
Helix 74	AI2	E	281	285	Right-handed alpha
Helix 75	AI3	E	293	298	Right-handed alpha
Helix 76	AI4	E	344	349	Right-handed alpha
Helix 77	AI5	E	401	405	Right-handed 310
Helix 78	AI6	E	546	550	Right-handed alpha
Helix 79	AI7	F	10	17	Right-handed alpha
Helix 80	AI8	F	35	38	Right-handed 310
Helix 81	AI9	F	42	49	Right-handed alpha
Helix 82	AJ1	F	52	54	Right-handed 310
Helix 83	AJ2	F	114	116	Right-handed 310
Helix 84	AJ3	F	117	125	Right-handed alpha
Helix 85	AJ4	F	127	139	Right-handed alpha
Helix 86	AJ5	F	161	167	Right-handed alpha
Helix 87	AJ6	F	191	201	Right-handed alpha
Helix 88	AJ7	F	213	224	Right-handed alpha
Helix 89	AJ8	F	224	229	Right-handed alpha
Helix 90	AJ9	F	249	255	Right-handed 310
Helix 91	AK1	F	273	277	Right-handed 310
Helix 92	AK2	F	281	292	Right-handed alpha
Helix 93	AK3	F	304	310	Right-handed alpha
Helix 94	AK4	F	311	314	Right-handed 310
Helix 95	AK5	F	329	343	Right-handed alpha

There are 45 sheets in PDB entry 5E6S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	11	first strand
Strand 2	A	581	586	anti-parallel
Strand 3	A	573	578	anti-parallel
Strand 4	A	560	564	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	27	first strand
Strand 2	A	30	35	anti-parallel
Strand 3	A	44	48	anti-parallel
Strand 4	A	55	57	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	76	first strand
Strand 2	A	83	94	anti-parallel
Strand 3	A	97	107	anti-parallel
Strand 4	A	115	118	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	181	first strand
Strand 2	A	166	173	anti-parallel
Strand 3	A	130	137	parallel
Strand 4	A	231	238	parallel
Strand 5	A	255	261	parallel
Strand 6	A	286	289	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	334	first strand
Strand 2	A	337	342	anti-parallel
Strand 3	A	351	355	anti-parallel
Strand 4	A	362	366	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	386	first strand
Strand 2	A	394	399	anti-parallel
Strand 3	A	407	412	anti-parallel
Strand 4	A	421	427	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	439	442	first strand
Strand 2	A	452	457	anti-parallel
Strand 3	A	468	474	anti-parallel
Strand 4	A	479	485	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	502	first strand
Strand 2	A	514	518	anti-parallel
Strand 3	A	525	529	anti-parallel
Strand 4	A	542	545	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	531	532	first strand
Strand 2	A	535	536	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	41	first strand
Strand 2	B	22	24	anti-parallel
Strand 3	B	56	57	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	66	first strand
Strand 2	B	80	85	anti-parallel
Strand 3	B	414	421	parallel
Strand 4	B	402	408	anti-parallel
Strand 5	B	345	349	anti-parallel
Strand 6	B	376	378	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	77	first strand
Strand 2	B	91	97	anti-parallel
Strand 3	B	387	395	anti-parallel
Strand 4	B	356	363	anti-parallel
Strand 5	B	369	373	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	189	first strand
Strand 2	B	143	149	anti-parallel
Strand 3	B	105	112	parallel
Strand 4	B	234	241	parallel
Strand 5	B	294	300	parallel
Strand 6	B	319	322	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	267	first strand
Strand 2	B	270	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	444	first strand
Strand 2	B	447	449	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	11	first strand
Strand 2	C	581	587	anti-parallel
Strand 3	C	573	578	anti-parallel
Strand 4	C	560	561	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	27	first strand
Strand 2	C	30	35	anti-parallel
Strand 3	C	44	49	anti-parallel
Strand 4	C	55	57	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	76	first strand
Strand 2	C	83	94	anti-parallel
Strand 3	C	97	107	anti-parallel
Strand 4	C	115	118	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	181	first strand
Strand 2	C	167	173	anti-parallel
Strand 3	C	130	137	parallel
Strand 4	C	231	238	parallel
Strand 5	C	255	261	parallel
Strand 6	C	286	289	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	327	334	first strand
Strand 2	C	337	342	anti-parallel
Strand 3	C	351	355	anti-parallel
Strand 4	C	362	366	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	382	386	first strand
Strand 2	C	394	399	anti-parallel
Strand 3	C	407	412	anti-parallel
Strand 4	C	421	427	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	439	442	first strand
Strand 2	C	452	457	anti-parallel
Strand 3	C	468	474	anti-parallel
Strand 4	C	479	484	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	499	502	first strand
Strand 2	C	514	518	anti-parallel
Strand 3	C	525	529	anti-parallel
Strand 4	C	542	545	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	531	532	first strand
Strand 2	C	535	536	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	41	first strand
Strand 2	D	22	24	anti-parallel
Strand 3	D	56	57	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	66	first strand
Strand 2	D	80	85	anti-parallel
Strand 3	D	414	421	parallel
Strand 4	D	402	408	anti-parallel
Strand 5	D	345	349	anti-parallel
Strand 6	D	376	378	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	77	first strand
Strand 2	D	91	97	anti-parallel
Strand 3	D	387	395	anti-parallel
Strand 4	D	356	363	anti-parallel
Strand 5	D	369	373	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	189	first strand
Strand 2	D	143	149	anti-parallel
Strand 3	D	105	112	parallel
Strand 4	D	234	241	parallel
Strand 5	D	294	301	parallel
Strand 6	D	319	323	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	266	267	first strand
Strand 2	D	270	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	442	444	first strand
Strand 2	D	447	449	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	11	first strand
Strand 2	E	581	586	anti-parallel
Strand 3	E	573	578	anti-parallel
Strand 4	E	560	564	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	27	first strand
Strand 2	E	30	35	anti-parallel
Strand 3	E	44	49	anti-parallel
Strand 4	E	55	57	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	73	76	first strand
Strand 2	E	83	94	anti-parallel
Strand 3	E	97	107	anti-parallel
Strand 4	E	115	118	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	177	181	first strand
Strand 2	E	166	173	anti-parallel
Strand 3	E	130	137	parallel
Strand 4	E	231	238	parallel
Strand 5	E	255	261	parallel
Strand 6	E	286	289	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	327	334	first strand
Strand 2	E	337	342	anti-parallel
Strand 3	E	352	355	anti-parallel
Strand 4	E	362	365	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	383	386	first strand
Strand 2	E	394	399	anti-parallel
Strand 3	E	407	412	anti-parallel
Strand 4	E	421	427	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	438	442	first strand
Strand 2	E	452	457	anti-parallel
Strand 3	E	468	474	anti-parallel
Strand 4	E	479	485	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	500	502	first strand
Strand 2	E	514	518	anti-parallel
Strand 3	E	525	529	anti-parallel
Strand 4	E	542	545	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	531	532	first strand
Strand 2	E	535	536	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	41	first strand
Strand 2	F	22	24	anti-parallel
Strand 3	F	56	57	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	62	66	first strand
Strand 2	F	80	85	anti-parallel
Strand 3	F	414	421	parallel
Strand 4	F	402	408	anti-parallel
Strand 5	F	345	349	anti-parallel
Strand 6	F	376	378	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	77	first strand
Strand 2	F	91	97	anti-parallel
Strand 3	F	387	395	anti-parallel
Strand 4	F	356	363	anti-parallel
Strand 5	F	369	373	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	182	189	first strand
Strand 2	F	142	149	anti-parallel
Strand 3	F	105	112	parallel
Strand 4	F	234	241	parallel
Strand 5	F	294	300	parallel
Strand 6	F	319	322	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	266	267	first strand
Strand 2	F	270	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	442	444	first strand
Strand 2	F	447	449	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5E6S

Analysis of interatomic Contacts of Structural Units in PDB entry:
5E6S